Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3680 ATGGATGATGCTGGGCATCGTGAAAATGGACGGCACAAAGCTGACCAATATAAATCAGCTCAGGGGCAGTGGCTGATGCAACATCAGCCTTCAATGAAGCAGATTATGGCGATAATGGCAGAAAGAGATGCTGCCATTCAAGAAAGAAATCTGGCCCTTTCTGAAAAAAAGGCAGCTCTTGCAGAGCGTGATATGGCATTCCTGCAGCGAGATACTGCGATTGCAGAACGGAATAATGCCATAATGGAACGAGATAATGCAATTGCTACCCTTCAATATCGAGAGAACTCCTTAGCCAATGGAAGTATGTCTTCTTGTCCTCCAGGATGCCAAATATCCCGTGGTGTCAAGCACATGCATCATCCTCAGCAGCAGGTGCATCATTTACCTCATATTGGTGATACTTCTTATGGCACACGGGAAATGAACACTGGTGATGACCTCCCAGCAGCACCAGTACCTACTGAAGCTGGGAAGTCACGGCGGGCCAAGCGACCAAAGGAGGGTAAGTCAATTTCACCTAATAAGAAGACTCCAAAAGCTACAAGGAAGCTCAAGAGGGACAGTGAAGACTTGAATAAGGTGATGTTTGGCAAGGCGCATGAGTGGAAGAATGGTCAGGAAATGGTTAATGGAGGCGATGATAAGCAGTTAGTGGTGTCAAAGGCTGATTGGAAAGGTCAGGACTTGGGTTTAAACCAAGTAGCATATGATGAATCAACCATGCCGGCACCAGTATGCTCTTGTACTGGTGTTCTGAGACAGTGCTACAAATGGGGGAATGGGGGGTGGCAGTCTGCTTGTTGCACAACCACTCTGTCAATGTATCCACTTCCTGCTGTTCCTAACAAGAGGCATGCCCGGGTTGGTGGTCGAAAGATGAGTGGAGGTGCTTTCAATAAGCTGCTTAGCCGGCTTGCAGCAGAAGGCCATGATCTCTCAAACCCGGTTGACCTCAAGGACCATTGGGCCAAACATGGAACAAACCGCTATATCACAATCAAGTAG 1008 0.4772 MDDAGHRENGRHKADQYKSAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLALSEKKAALAERDMAFLQRDTAIAERNNAIMERDNAIATLQYRENSLANGSMSSCPPGCQISRGVKHMHHPQQQVHHLPHIGDTSYGTREMNTGDDLPAAPVPTEAGKSRRAKRPKEGKSISPNKKTPKATRKLKRDSEDLNKVMFGKAHEWKNGQEMVNGGDDKQLVVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGGAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3680 335 Coils Coil 51 71 - -
Sto9g3680 335 PANTHER - 1 335 IPR010409 -
Sto9g3680 335 MobiDBLite consensus disorder prediction 158 174 - -
Sto9g3680 335 MobiDBLite consensus disorder prediction 1 15 - -
Sto9g3680 335 MobiDBLite consensus disorder prediction 133 189 - -
Sto9g3680 335 MobiDBLite consensus disorder prediction 1 21 - -
Sto9g3680 335 Pfam GAGA binding protein-like family 1 335 IPR010409 -
Sto9g3680 335 PANTHER PROTEIN BASIC PENTACYSTEINE6 1 335 - -
Sto9g3680 335 SMART GAGA_bind_2 1 335 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3680 Sto-Chr9 35192474 35193604 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3680 65 335 BBR or BPC Transcription factor family AT5G42520 65.172 5.59e-124 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Sto9g3680 GAGA_bind 7.3e-108 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3680 - - gmx:100783502 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3680 9 35192474 35193604 Sto9g3680 9 35192474 35193604 ECH