Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3652 ATGGACTCTATAGACTGGATTAAGGTACGGTTCAATGTACTGAATATTGAAAGTTGGATGGAGCTGCCAAAGGTagaaaggaagaggaagaggaagaggatggaaTCGAATAGGGAATCGGCGAGACGGTGTCGTATGCGAAAGCAGAAGCGCGTGGATGATCTGATGGCAGAAATGGGTGAACTCCAAAAGGAGAATTCAGAAATGGTGGGAATCATAAAGTTAACAAGAGAGCAGTATTTGAATGTTGAAGCACACAACTCCGTTTTGAGAGCCCAGATTGTGGAACTTACCCACAGCCTACAATCACTAAATCATATCATCAACACTACTCAACCACTCACTTTCTTCTATCCTGATAATTATCCTCTATCTTAA 378 0.3836 MDSIDWIKVRFNVLNIESWMELPKVERKRKRKRMESNRESARRCRMRKQKRVDDLMAEMGELQKENSEMVGIIKLTREQYLNVEAHNSVLRAQIVELTHSLQSLNHIINTTQPLTFFYPDNYPLS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3652 125 PANTHER BZIP TRANSCRIPTION FACTOR 44 21 112 - -
Sto9g3652 125 SMART brlzneu 25 89 IPR004827 GO:0003700|GO:0006355
Sto9g3652 125 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 32 47 IPR004827 GO:0003700|GO:0006355
Sto9g3652 125 Coils Coil 45 65 - -
Sto9g3652 125 Gene3D - 27 82 - -
Sto9g3652 125 SUPERFAMILY Leucine zipper domain 29 83 IPR046347 GO:0003700|GO:0006355
Sto9g3652 125 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 27 90 IPR004827 GO:0003700|GO:0006355
Sto9g3652 125 PANTHER BZIP TRANSCRIPTION FACTOR 21 112 - -
Sto9g3652 125 CDD bZIP_plant_GBF1 34 80 IPR045314 GO:0003700|GO:0006355
Sto9g3652 125 Pfam bZIP transcription factor 28 81 IPR004827 GO:0003700|GO:0006355
Sto9g3652 125 MobiDBLite consensus disorder prediction 27 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3652 Sto-Chr9 35035073 35037340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3652 17 108 bZIP Transcription Factor Family AT4G34590 60.870 2.10e-29 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto9g3652 bZIP_1 3.8e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3652 K25786 - ini:109161590 108.997