Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3649 atgagggtgaggcacgcgtgtgggtactggactactgggaataatGATGGTAATTATAAGTTGGAGGCAAGTTTGGAAGAAGGTAATTATCCATTTGGCAGATCAAAAGGTTTAAAGGATTCCATGATTGAAGGGTTAGGTTATGAATGGGGAAGTGGCGGTGCAGGAAGCTGCTTGAGCAATGAGTGTGATGATAATAAGAAGCACTACTCATCCTCAGACCAGCTTGATGACTATTCCAATTCCAACATaataaaggaagaagaagagattggTTTCCCCAAACTCACAGAAATGCTCAACACCACTTCCTCTATGGACCTCAAACATTTCAATGCTCTTAGCGACAAGCTCTTGCTCAACTCCACCACACACTTGTACTCCAACACCCCCAATATGGGAATAACTAGAGGCAGCTATAGCTTTACCCACATTTATCCTACTATTAATATTTCTAACTTTAATCAATCATCCTCCCATATCAACATCCACTCctcacactcacactcacaTCTATTACCCTCATCTCCAACTTCACATCATCATCCCACATTTAATCACAACCTTCCTTCTCCTCTCCATCATATGCAACAACCCATTCATACCTCCTCATGCAATAATTCTAGTCATCCATCACACTTCACAAATGTTATGGCAGAAACAAAGAGGCCCAACGCTTTGATGGAGTCAAAGGCTTCTCAATCTCAAACGCTACCAAAAAAATCACGATTGGAATCGCGCTCATCATGCCCTCCCTTTAAGGTTAGGAAAGAGAAACTAGGAGATAGGATTGCGGCTCTTCAGCAGCTGGTGGCTCCTTTTGGCAAGACAGACACAGCATCCGTACTTATGGAGGCCATTGGGTATATCAAATTTCTTCAAAACCAAGTCGAGACACTGAGCGTTCCATACATGAAATCATCAGGGAAGCAGACCAACAGAGCAATGCAAAGGGTATCAAGCATAGAGGAGGGGAAGGAGGACACAGAACTTGATCTTAGAAGCCGAGGCCTGTGTCTCGTGCCATTGTCCTGCATGTCCTATTTCACAGGAGATGGTGCTAGTGGTGGAGTGTGGCAACAATCTGATCACTTTGGTGGAGCAACTTAA 1110 0.4018 MRVRHACGYWTTGNNDGNYKLEASLEEGNYPFGRSKGLKDSMIEGLGYEWGSGGAGSCLSNECDDNKKHYSSSDQLDDYSNSNIIKEEEEIGFPKLTEMLNTTSSMDLKHFNALSDKLLLNSTTHLYSNTPNMGITRGSYSFTHIYPTINISNFNQSSSHINIHSSHSHSHLLPSSPTSHHHPTFNHNLPSPLHHMQQPIHTSSCNNSSHPSHFTNVMAETKRPNALMESKASQSQTLPKKSRLESRSSCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSSGKQTNRAMQRVSSIEEGKEDTELDLRSRGLCLVPLSCMSYFTGDGASGGVWQQSDHFGGAT 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3649 369 MobiDBLite consensus disorder prediction 165 185 - -
Sto9g3649 369 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 244 293 IPR011598 GO:0046983
Sto9g3649 369 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 69 352 - -
Sto9g3649 369 MobiDBLite consensus disorder prediction 227 244 - -
Sto9g3649 369 MobiDBLite consensus disorder prediction 224 250 - -
Sto9g3649 369 CDD bHLH_AtbHLH_like 251 301 IPR045239 -
Sto9g3649 369 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 254 306 IPR036638 GO:0046983
Sto9g3649 369 Gene3D - 254 320 IPR036638 GO:0046983
Sto9g3649 369 PANTHER OS01G0105700 PROTEIN 69 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3649 Sto-Chr9 34999335 35008557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3649 68 369 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 40.960 3.49e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3649 - - lang:109326222 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3649 9 34999335 35008557 Sto9g3649 9 34999335 35008557 ECH