Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3623 ATGGCGTACAAAACGACTGTGGATATTACACGTCAGAAGCTGGACGCTAGGCGATTTAGACTTTTGACAGCGATACAAGCTATGGCGGAGCTTGAGAATCCTTCTTCAATGGCAGATTCTACATCTACCGGAGAAGCTACCTTTTCATCCTCTGGTTTAGAAAACGCACCTAATGAACCACCACCACCGAAAAAGAAGCGAAACCTCCCTGGAATGCCAGGTACTTTGAATTTTTTGGATACTAATCGAACCACCAAGGAAGTTCGAAAGAGAGTCTACGTGTGCCCCGAGCCTTCCTGCGTCCACCATAATCCGTCGAGGGCGCTGGGTGATCTTACTGGCATTAAGAAGCATTTTTGTAGAAAACATGGCGAAAAGAAGTGGAAATGCGAGCGTTGCTCTAAGAAATACGCGGTACAGTCTGATTGGAAGGCCCATATGAAGACTTGCGGAACTAGAGAGTACAAATGTGACTGCGGCACCTTGTTCTCCagGAGGGACAGCTTCATCACGCACAGGGCCTTTTGCGATGCCTTAGCGGAGGAGAGCGCCAGAGCCCAAACCCTAGCCGTCGGTGGTGGCTCCGAGGGGAATTCGGATAGGAAAGCTACTTTGCCTTCGCCACCACAGCCTCCACTTACTCCGTCTACCTCTGTGGTGTCTCCTTCTTTGTCCATCCAGAGCTCAGAAGTCTCGGAAAACCCAATCAGGTTGTCCCCGCCGTCAACAAACGTGACGTGTGTACCGACCACAGTCACAAACGGCACCTCCTCCAGTTCCACCAGTGTTTTTGCAAGTATATTTGCATCCTCAACTGCAGCTCCATCCCAGGCATCACCATCTTACTCAAATCTGATGTCTAGCTTGGCTAGCTCGGATTGCCCAACGATATCTGCCATAGAGCCCACATCCCTGTCTCTCTCAACATCACTTTATCTCTCCAATAATGACACCTCTCTGTTCCCGGACCAGCACGAGCCTCGGCACTACACTTTGACTACAGCTCCACAGCCTGCATTGTCAGCCACTGCATTACTCCAAAAGGCTGCTCAAATTGGTGCGGCAGCATCCAATGCTTCGTTTCTTCGTGGTTTAGGCTTAGCAGCAGCATCCTCCTCTGCACAAGATGATAGTACCCCTACAAAATGGAATGGCCATGTAAAGACAGAGAATCACTCGGTATCTGATGGTCTTGTGCTTGGAATTTCTTCTGCTGGGAATGCCTGTTTCGCAGATATGATGATGGACTCGCCTTCGCCATTTGGGGAACGGCCCATGACTCGTGATCTTCTTGGTCTTAACATAGGTGGTGCTGGTGACGGAGCCAGCGGGGGCCGTTTTTCTGCTTTACTCACATCTTTTGGAGGAAGATTCGATGTTGCAGATACTTCAGCCGGAGGGAGGAGTTCGCCAGCACAGGATTAG 1425 0.5018 MAYKTTVDITRQKLDARRFRLLTAIQAMAELENPSSMADSTSTGEATFSSSGLENAPNEPPPPKKKRNLPGMPGTLNFLDTNRTTKEVRKRVYVCPEPSCVHHNPSRALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARAQTLAVGGGSEGNSDRKATLPSPPQPPLTPSTSVVSPSLSIQSSEVSENPIRLSPPSTNVTCVPTTVTNGTSSSSTSVFASIFASSTAAPSQASPSYSNLMSSLASSDCPTISAIEPTSLSLSTSLYLSNNDTSLFPDQHEPRHYTLTTAPQPALSATALLQKAAQIGAAASNASFLRGLGLAAASSSAQDDSTPTKWNGHVKTENHSVSDGLVLGISSAGNACFADMMMDSPSPFGERPMTRDLLGLNIGGAGDGASGGRFSALLTSFGGRFDVADTSAGGRSSPAQD 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3623 474 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 82 467 - -
Sto9g3623 474 MobiDBLite consensus disorder prediction 33 79 - -
Sto9g3623 474 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 82 467 - -
Sto9g3623 474 MobiDBLite consensus disorder prediction 187 242 - -
Sto9g3623 474 MobiDBLite consensus disorder prediction 33 55 - -
Sto9g3623 474 MobiDBLite consensus disorder prediction 217 242 - -
Sto9g3623 474 Gene3D Classic Zinc Finger 106 186 - -
Sto9g3623 474 SUPERFAMILY beta-beta-alpha zinc fingers 124 165 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3623 Sto-Chr9 34862676 34866498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3623 40 470 IDZ Gene Family AT5G66730 42.803 1.47e-94 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto9g3623 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3623 K25869 - qsu:112041099 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3623 9 34862676 34866498 Sto9g3623 9 34862676 34866498 ECH