Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3605 ATGGAACTGTTTCTCCTCCCTCTCTTCATACTATACTTGGTAGCTTCAAATGGCAAAGCAGAGCAGAACTACTCAGCAAATTCCGTTATGAGTTGCGCCAACAACGATGAGAAAGGACCTTCTTCAGCTTTCCTTTACACCTGTAATGGCCTCAACAAATCCTGCTTGGCCTTCCTCATCTTCAAATCCCAACCTCCTTATAATACCATTCCTGCAATTTCAAATTTGACATCATCGGACCCACAAGAGCTCACCACAATCAACCATGTCACTATCTCCACAGTGTTCCCAACTGGCAAAGAGGTAATTGTTCCTGTAAATTGTTCTTGTAAAACTAGGGACTACTACGAAGCAGAAACCACATATAGACTTCCCACTATCCAAACTTATTTCACTATAGCTAATGATACGTATCAGGGATTGTCTACTTGTGATTCTCTCAAGCGTTATAATCCCTATGGGGAATTAGACTTGCATCCTGGTATGCTATTACATGTCCCACTCAGATGTGCTTGTCCCACTGCCTCTCAAACTCTCAATGGCACCAACTTTTTACTGACTTACCCTATTTATTGGGGTGATAATATATCCGCTCTTGCCGTAAGATTCAATGTAAGTGAAAGTTCTCTTCTTGATGCAAATGGTATTACCACACCCACTCTTTTTCCATTCACGACCATTCTAATTCCTTTGCCAAGTGAACCAGATAGCTCAACCACCATAGTTCACCATCTTCCTCCTCCTGCAGCTATTTCACCTGCTGCTAATGTTTCCCCCACCAACGCAAAAACAAAACTTTACGTGGCTGTTTCCACCAGTACTGGGGGATTCGTGGTGGTTCTGTGTGGGATTTGGTTTTCTGTGTTTGTGTTGAGAAAGAAATCACAATCAGCAAGGTTGGTTGAGGAGGGTACAAATACAATAGGGAAAAGAACCAAGTGGACGGCTTCAGAAGACATCCGTGAGGAGATTGCAAGCATTGAGGATGACTCTAAAGAGTACAGACTGGAGGAGATAAAGAAGGCCACTGAGAATTTCAGTTCAAAGAACAGAATACAGGGCTGTGTGTACAGGGGAGTGTTTGGGAAGGACATATTGGTAGTCAAGAAAATGAGTGCAGATGCATCCAAGGAAGTTAACATGCTGAAGAAGATCAATCATTTCAATCTGATAAAGCTGCGAGGTTACTGCAAACACGAGGGCTTCTTCTACCTTGTTCTTGAATACATGGAGAACGGCTCTCTCAGAGAATGGCTGAGGAAAAAAAGCATGTCCACGGATCACCAGAGTTGGAGTAAGAGGATCCAGATTGCTCTGGACATTGCTAATGGACTCCAATATCTTCACAACTTCACAGAGCCTTGCTATGTGCACAAGGATATTAACACTAGCAACATCCTACTGAACAAGAACGCGAGGGCCAAGATTGCAAATTTCAGTCTTGCTCTTGCAAAAGAATCACAGGGGAAAACAACTTGCACATCCCACGTGGTGGGAACTAGGGGGTACATGGCCCCAGAGTATATGGAGGCAGGGATGGTGAGTCCCCAAATGGACGTATATGCCTTTGGAGTGGTGTTGTTGGAATTGATCACAGGGAAAGATTGTGTTATAgttgaagatggaagagaagTAATGCTTTCTGCAGTCATAGTGTCTCTCATGGCTAATGAGAATGCAGAAGCCAATCTTGGTTCGTTGGTGGATCCTAATCTGAGTGGATACAATGGGAAAGCATTAGCTGGTGAGCTGGCAAAACTAAGTGTGGCTTGCTTGCTTCAAGAACCAGCCAGCAGACCAAGCATGGCTGATATAGTCTCCAGCTTATTGAAGATACAAGCGAGTGTGCATCTAAGAATATCACCCTCCAAAAATTGTGACAGTCCTCGCCTCCCGAGGTGA 1902 0.4353 MELFLLPLFILYLVASNGKAEQNYSANSVMSCANNDEKGPSSAFLYTCNGLNKSCLAFLIFKSQPPYNTIPAISNLTSSDPQELTTINHVTISTVFPTGKEVIVPVNCSCKTRDYYEAETTYRLPTIQTYFTIANDTYQGLSTCDSLKRYNPYGELDLHPGMLLHVPLRCACPTASQTLNGTNFLLTYPIYWGDNISALAVRFNVSESSLLDANGITTPTLFPFTTILIPLPSEPDSSTTIVHHLPPPAAISPAANVSPTNAKTKLYVAVSTSTGGFVVVLCGIWFSVFVLRKKSQSARLVEEGTNTIGKRTKWTASEDIREEIASIEDDSKEYRLEEIKKATENFSSKNRIQGCVYRGVFGKDILVVKKMSADASKEVNMLKKINHFNLIKLRGYCKHEGFFYLVLEYMENGSLREWLRKKSMSTDHQSWSKRIQIALDIANGLQYLHNFTEPCYVHKDINTSNILLNKNARAKIANFSLALAKESQGKTTCTSHVVGTRGYMAPEYMEAGMVSPQMDVYAFGVVLLELITGKDCVIVEDGREVMLSAVIVSLMANENAEANLGSLVDPNLSGYNGKALAGELAKLSVACLLQEPASRPSMADIVSSLLKIQASVHLRISPSKNCDSPRLPR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3605 633 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 1 619 - -
Sto9g3605 633 Gene3D Phosphorylase Kinase; domain 1 306 409 - -
Sto9g3605 633 Pfam LysM domain 193 230 IPR018392 -
Sto9g3605 633 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 1 619 - -
Sto9g3605 633 Coils Coil 317 337 - -
Sto9g3605 633 ProSiteProfiles LysM domain profile. 186 229 IPR018392 -
Sto9g3605 633 ProSiteProfiles Protein kinase domain profile. 266 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3605 633 Pfam Protein kinase domain 370 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3605 633 SUPERFAMILY Protein kinase-like (PK-like) 331 609 IPR011009 -
Sto9g3605 633 Gene3D LysM domain 186 230 IPR036779 -
Sto9g3605 633 SUPERFAMILY LysM domain 186 231 IPR036779 -
Sto9g3605 633 Gene3D Transferase(Phosphotransferase) domain 1 410 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3605 Sto-Chr9 34781875 34783776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3605 4 617 Receptor kinase-like Gene Family AT2G23770 39.617 3.39e-132 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sto9g3605 PK_Tyr_Ser-Thr 1.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3605 - - gmx:100806221 732.635