Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3599 ATGTTGAGGGACGAAGGTGTGGGTTCGAGGAGCGCTAGGCATAGCGCCACCGTTTCTACGGTGTTCAATAAAGTTCTGGTAGCTGTGAAGGCGGAGAGGGTGATCTCTAAGACCGCATTAGCCTGGGCACTCACTCATGTCGTTCACTCTAGTGATTGTATCACGCTGCTTGCTGTATACTGTGGCGAGAAAACTGGCAGACGATTCTGGAATTTTTCTAGATTCGCCGGAGATTGTACGAACGGACGCCGGGAAAAGTTACCGGAGCGGATTTGCGAAATCTCCGAGTCTTGTTCTCAGATGGTGCTTGAGTTGCACAATCAAATTGAGGTTAGAGTGAAGATTAAGGTGGTCACGGGTACGCCCAGTGGTGCTGTGGCGACTGAAGCAAGATGTAGTGGGTTCAACTGGGTCATTCTGGACAAGAAGTTGAAACACGAGGTGAAGCATTGCTTGGATGAACTCCAATGTAGCATCGTAGTGATGAACGGTTCACAGCCAAAAGTCCTTAGGCTTAACTTAGGATGTTCTGATGAAATCCAAACCCCCTTCTTGTCTGCTGCTTCTTCACCAGATATAGATTCTGGAAGGCTACAAGGTCACAGATTGAAGCCCTCCACCCCAGTTAGTAGCCCTGAAGAAGGAACTACTTCCGAAACAAAATTCACCTTAGTAAATTCAGTGTCAAGTTCTGACATAGTGACTTCTGTTTTTCTGGTCTATGAACAAAATCCTCTGTACGAGGGTAAGGGGGCACAGAGAAGGAAACAAAGAGCAATTAATGAACCAGAAGAAGGCTTCCATGCCCAGCCACCATTGGACTTGGAATTGGAAAGGGAAAGGAGTCTTTCTTCGAGGAAGCCCCCGATATCTTCTTTGGCTAGTGACAACAAGAGTGTAATTTGGATTTCTCAAAACCACGTTGTGGACGAGAAGCCTCAAATAATCAACAACAACAGAATTAACCAAAGAACTAAATCTCCCACGTCTAAAACTCTACTTGAAAGCTTTGTACATTGTGACCAAGAGAAGACGACTAATGGAGGTGGGCTTAAGCAAGCTCAAAGTAGAAACTACGTTGTGCACTCGAGCATCAGAGATACAATTCCTGTGGGCAGAACTTCCTCTGTACCTCCTCCCCTTTGCTCACAGTGTCAGAACAAAACACCAGTTTTTGGAAAACCTCCGAGACGCTTCTCCTACGAAGAGATAGAGGAAGCTACTGATATGTTCTCTGATGTGAATTTCTTGGCTGAAGGTGGATTTGGGGTGGTTCACAGGGGAGTACTAAGAGATGGCCAGGTCGTTGCGGTGAAACAGTTGAAGTTTGGTGGGTCCCAAGCAGATCTTGATTTCTGCAGAGAAGTCCGAGTATTGAGTTGTGCACAACACAGAAATGTTGTGTTGTTGATAGGATTTTGCGTGGATGACAATATCAGGATATTAGTCTATGAGTACATATGTAATGGATCCCTGGAGCTCTACTTACATGGAAACAGGAAAGGCGCTTTAGATTGGAACTCGCGCATGAAGATAGCAATAGGAGCTGCACGAGGTTTACGCTACCTTCATGAAGATTGTAGAGTGGGCTGCATAGTGCACAGAGACCTTAGACCCAGAAATATCCTCTTAACTCATGATTTTGAACCTGTGGTGGCGGATTTTGGCCTTGCCAGGTGGCAGTCGGAATGGAACATAAATACTGATGATCGAGTCATTGGAACTTCGGGGTATCTTGCACCAGAGTATCTGGACGCCGGCAATCTTACATATAAAGTAGATGTTTATGCATTTGGAATTGTCTTATTAGAGTTAATAACAGGTCGAAGAATTAGTGAGTTGGAACATTTCAATGGACACTCGTTTCTTTCTGAGTGCTTTCACCCACTGCGCATGTTAGAGCCCAATCACATCTTGGAGTTTGAGGCGTCACAGGAATTTCATTTTCAATTGCAAGCAATGGCCCGAGCTGCTTCCTTGTGTCTATGTCTAGATCCCGATGCCAGACCCCCCATGTCTAAGATCCTCAGAGTGCTGGAAGGGGGTGATCCAGTTCGTCCTGTCGGCTTAGACCTAAACTCAGTCGGTAACAGAAGTGGCCATTTAAGTGGTTTGAGGTCTCACACTCAAGCTCAAGGTACAAGATGTCATTCTCGTAGGCTTTCACATTGA 2172 0.4572 MLRDEGVGSRSARHSATVSTVFNKVLVAVKAERVISKTALAWALTHVVHSSDCITLLAVYCGEKTGRRFWNFSRFAGDCTNGRREKLPERICEISESCSQMVLELHNQIEVRVKIKVVTGTPSGAVATEARCSGFNWVILDKKLKHEVKHCLDELQCSIVVMNGSQPKVLRLNLGCSDEIQTPFLSAASSPDIDSGRLQGHRLKPSTPVSSPEEGTTSETKFTLVNSVSSSDIVTSVFLVYEQNPLYEGKGAQRRKQRAINEPEEGFHAQPPLDLELERERSLSSRKPPISSLASDNKSVIWISQNHVVDEKPQIINNNRINQRTKSPTSKTLLESFVHCDQEKTTNGGGLKQAQSRNYVVHSSIRDTIPVGRTSSVPPPLCSQCQNKTPVFGKPPRRFSYEEIEEATDMFSDVNFLAEGGFGVVHRGVLRDGQVVAVKQLKFGGSQADLDFCREVRVLSCAQHRNVVLLIGFCVDDNIRILVYEYICNGSLELYLHGNRKGALDWNSRMKIAIGAARGLRYLHEDCRVGCIVHRDLRPRNILLTHDFEPVVADFGLARWQSEWNINTDDRVIGTSGYLAPEYLDAGNLTYKVDVYAFGIVLLELITGRRISELEHFNGHSFLSECFHPLRMLEPNHILEFEASQEFHFQLQAMARAASLCLCLDPDARPPMSKILRVLEGGDPVRPVGLDLNSVGNRSGHLSGLRSHTQAQGTRCHSRRLSH 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3599 723 MobiDBLite consensus disorder prediction 250 274 - -
Sto9g3599 723 Gene3D Phosphorylase Kinase; domain 1 378 486 - -
Sto9g3599 723 MobiDBLite consensus disorder prediction 187 220 - -
Sto9g3599 723 SUPERFAMILY Protein kinase-like (PK-like) 391 679 IPR011009 -
Sto9g3599 723 MobiDBLite consensus disorder prediction 699 723 - -
Sto9g3599 723 Pfam Protein tyrosine and serine/threonine kinase 417 677 IPR001245 GO:0004672|GO:0006468
Sto9g3599 723 Gene3D Transferase(Phosphotransferase) domain 1 487 684 - -
Sto9g3599 723 PANTHER OS01G0253100 PROTEIN 19 714 IPR045271 GO:0004714|GO:0006468
Sto9g3599 723 ProSitePatterns Tyrosine protein kinases specific active-site signature. 532 544 IPR008266 GO:0004672|GO:0006468
Sto9g3599 723 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 19 714 - -
Sto9g3599 723 SMART tyrkin_6 411 679 IPR020635 GO:0004713|GO:0006468
Sto9g3599 723 MobiDBLite consensus disorder prediction 204 220 - -
Sto9g3599 723 ProSiteProfiles Protein kinase domain profile. 411 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3599 Sto-Chr9 34723028 34728649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3599 399 680 Trihelix Transcription Factor Family AT5G38560 43.051 2.39e-73 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Sto9g3599 PK_Tyr_Ser-Thr 7.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3599 - - gmx:100779310 1087.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3599 9 34723028 34728649 Sto9g3599 9 34723028 34728649 ECH