Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3597 ATGCGAAGCATAGCACCTTTCCCAGACTTATCCTTAAACATCAGCCCTCCAGATTATAAGACAACAGCGCCCAAAACGACGCCGCTTTACAGTGATATGTGCTCTTCTGCCTCTGATTCTGGAAGTAGCGAGAGTGGTTTGAGCCATGAAAATGCGTTTTTGCAGCGTGAGCCCACACTGAGCTTAGGCATCAATCATAAAATGGTGGATCAATATCATCATCAAAGAAACGTGAATCGTCATCATCAGACTCACATCTACGGCAGAGTTATGAAAAGAAGCATCAGAGCTCCTAGAATGCGATGGACCACCACCCTCCATGCCCATTTCGTTCACGCCGTTCAGCTTCTTGGCGGCCATGAGAGGGCCACTCCAAAGTCTGTCTTAGAGTTGATGAATGTCAAAGATTTAACCCTAGCTCACGTCAAGAGTCACTTACAGATGTATAGAACAGTGAAGAGCACTGACAAGTGTACAGCGGAGGCCAGGACAAATGGTGGTGGACAAAAACCAGAAACAGAAACAGAAACGAGTTTGACGTACTCTCATGTAAAGGCGAGTGAAAGCAAGGTAGATGGAAGAGGTGAAGAGGTGTGGAATTGCGTGGGGTTATTGGCGGAAAAGACGGTTGACCTAGAATTCAGCCTGGGAAGAGCCAGTTGGAATAACACTCACCACGTCCAATCCCAATCATCCACAGACCTAACTCTTCTCAAATGTTAA 723 0.4647 MRSIAPFPDLSLNISPPDYKTTAPKTTPLYSDMCSSASDSGSSESGLSHENAFLQREPTLSLGINHKMVDQYHHQRNVNRHHQTHIYGRVMKRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKCTAEARTNGGGQKPETETETSLTYSHVKASESKVDGRGEEVWNCVGLLAEKTVDLEFSLGRASWNNTHHVQSQSSTDLTLLKC 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3597 240 MobiDBLite consensus disorder prediction 18 49 - -
Sto9g3597 240 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 98 151 IPR006447 GO:0003677
Sto9g3597 240 PANTHER TRANSCRIPTION FACTOR KAN4-RELATED 4 176 - -
Sto9g3597 240 SUPERFAMILY Homeodomain-like 95 152 IPR009057 -
Sto9g3597 240 Gene3D - 97 154 - -
Sto9g3597 240 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 4 176 IPR044847 GO:0000976|GO:0006355|GO:0010158
Sto9g3597 240 Pfam Myb-like DNA-binding domain 99 150 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3597 Sto-Chr9 34708157 34710505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3597 1 179 G2-like Transcription Factor Family AT5G42630 59.259 1.46e-52 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto9g3597 Myb_DNA-binding 8.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3597 - - pvy:116140029 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0283 5 1679391 1682019 Sto9g3597 9 34708157 34710505 CCT
Sto9g3597 9 34708157 34710505 Sto9g3597 9 34708157 34710505 ECH