Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3591 ATGGCTATCCGGGTTACCTTCTCCTTCTCGGGCTACGTCGCCCAAAACCTGGCTTCCTCCGCCGGTTGTCGTGCGAGTAATTCCCGCTGCTTCCAAGAATGCTGGATCCGATCTCGCTTATTTGGCTCCAGTCATAAAACTGATCGTGATCCTTCCGGCGGCGTGCGTAATTACCATTCCGATTATACACGCCCAAAATCGAATTGCTGGCCTAAGAATTCAGGCTCTCTGTATGCTGCTATCTCCGAAGAATTTCTTGGTGATAATTTTACAAACCCGATTGTCTTGGGTTTGATTTCCATTATGAAGTCAACCGTTTGTGCATCTGCTTCGTCTGCCGCGACTATGAGTGTGTTGGGTGTTTCCCCGAGTTCGGCCACTTCGATTATACCCTTTTTAAAGGGATCGAAGAGCCTTCCTAGTAACGAGTCAATTTCCCTTACCTCAACTTTGGAGGTGGATAAAGGAGGGACACGGTGTTATGATGCTTGTGATAGTGCGAATTCAGGGTTCGCTCCCAAAGGTTTCGAGAAGTCATGTTGGATGTCGCGGTTCTTGAATGTTTGTTCAGATGATGTCAAGGCTGTGTTTACTGCTGTGACCGTTAATTTGCTCTTCCGCTCGTTCTTGGCTGAACCGAGATCCATTCCCTCCACTTCTATGTACCCAACTCTGGACGTCGGTGACCGTATTTTAGCGGAGAAGGTTTCCTTCTTCTTTAGAAAGCCCGACGTTTCAGATATAGTCATATTTAAGGCACCTCCAATCTTACAGGAAGTTGGATATAGTTCAACTGAtgtatttattaaaagaattgtGGCAAAGGCTGGGGACTCTGTGGAGGTTCGTGACGGAAAGCTACTGGTGAATGGTGTTGCTCAAGAAGAGCAATTTGTATTAGAGCCAGTTGCTTATGATATGGATCCAATGGTAGTTCCAGAAGGTTATGTGTTTGTAATGGGAGACAATCGTAATAATAGCTTTGACTCACATAATTGGGGTCCTCTCCCTGTAGAGAACATCATTGGTAGATCCTTGTTCCGGTACTGGCCCCCATCTAAAGTATCTGACACCCTTTCTAAACTACCATCTCCAACTTCTGCGGCAATTTCCTGA 1116 0.4561 MAIRVTFSFSGYVAQNLASSAGCRASNSRCFQECWIRSRLFGSSHKTDRDPSGGVRNYHSDYTRPKSNCWPKNSGSLYAAISEEFLGDNFTNPIVLGLISIMKSTVCASASSAATMSVLGVSPSSATSIIPFLKGSKSLPSNESISLTSTLEVDKGGTRCYDACDSANSGFAPKGFEKSCWMSRFLNVCSDDVKAVFTAVTVNLLFRSFLAEPRSIPSTSMYPTLDVGDRILAEKVSFFFRKPDVSDIVIFKAPPILQEVGYSSTDVFIKRIVAKAGDSVEVRDGKLLVNGVAQEEQFVLEPVAYDMDPMVVPEGYVFVMGDNRNNSFDSHNWGPLPVENIIGRSLFRYWPPSKVSDTLSKLPSPTSAAIS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3591 371 PANTHER SIGNAL PEPTIDASE I 1 360 IPR000223 GO:0006508|GO:0008236|GO:0016020
Sto9g3591 371 Pfam Signal peptidase, peptidase S26 193 350 IPR019533 GO:0004252|GO:0006465
Sto9g3591 371 TIGRFAM sigpep_I_bact: signal peptidase I 194 351 IPR000223 GO:0006508|GO:0008236|GO:0016020
Sto9g3591 371 SUPERFAMILY LexA/Signal peptidase 207 355 IPR036286 -
Sto9g3591 371 ProSitePatterns Signal peptidases I signature 3. 317 330 IPR019758 GO:0004252|GO:0016021
Sto9g3591 371 Gene3D Umud Fragment, subunit A 206 362 - -
Sto9g3591 371 CDD S26_SPase_I 212 344 IPR019533 GO:0004252|GO:0006465
Sto9g3591 371 ProSitePatterns Signal peptidases I serine active site. 218 225 IPR019756 GO:0004252|GO:0016021
Sto9g3591 371 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Sto9g3591 371 PANTHER THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED 1 360 - -
Sto9g3591 371 PRINTS Bacterial leader peptidase 1 (S26A) family signature 209 225 IPR000223 GO:0006508|GO:0008236|GO:0016020
Sto9g3591 371 PRINTS Bacterial leader peptidase 1 (S26A) family signature 268 280 IPR000223 GO:0006508|GO:0008236|GO:0016020
Sto9g3591 371 PRINTS Bacterial leader peptidase 1 (S26A) family signature 312 331 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3591 Sto-Chr9 34676379 34678438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3591 221 351 MADS-box Gene Family AT1G29960 34.586 3.07e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3591 K03100 - jre:109010298 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3591 9 34676379 34678438 Sto9g3591 9 34676379 34678438 ECH