Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3537 ATGAGAAAGTGGGGGAAGTGGGTGGCTGAGATCAGAGAACCCAACAAGAGATCAAGGCTTTGGTTGGGGTCGTACAACACACCCGTGGCCGCCGCTCGAGCATACGACATCGCCGTTTTCTATCTGCGAGGCCCTTCTGCTCCGCTTAACTTCCCCGAATTGCTTTTCCAAGACGACGCTCATTTGCCCCACGTGTCCCCTGATTCCATACGTAAAAAGGCCACCCAAGTCGGCGCCAAAGTTGATGCTCTCCAAACTCAATCCTCCAATCCTACAATTCCTTTCCACCACAAACCCGACTTGAATCAATTCCCCAACATCTTCTAA 327 0.5168 MRKWGKWVAEIREPNKRSRLWLGSYNTPVAAARAYDIAVFYLRGPSAPLNFPELLFQDDAHLPHVSPDSIRKKATQVGAKVDALQTQSSNPTIPFHHKPDLNQFPNIF 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3537 108 CDD AP2 1 54 IPR001471 GO:0003700|GO:0006355
Sto9g3537 108 Gene3D AP2/ERF domain 1 53 IPR036955 GO:0003700|GO:0006355
Sto9g3537 108 SUPERFAMILY DNA-binding domain 2 53 IPR016177 GO:0003677
Sto9g3537 108 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 1 106 - -
Sto9g3537 108 ProSiteProfiles AP2/ERF domain profile. 1 52 IPR001471 GO:0003700|GO:0006355
Sto9g3537 108 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 1 106 - -
Sto9g3537 108 Pfam AP2 domain 2 44 IPR001471 GO:0003700|GO:0006355
Sto9g3537 108 SMART rav1_2 1 58 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3537 Sto-Chr9 34414005 34414331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3537 1 90 AP2-EREBP Transcription Factor Family AT5G67190 73.333 3.18e-41 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto9g3537 AP2 1.2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3537 K09286 - pvy:116125671 156.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3537 9 34414005 34414331 Sto9g3537 9 34414005 34414331 ECH