Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3531 ATGCCTAAACCACATCATTTCCCTCTTCCCCTTCATCTTCAAATCTTGCTCTCACATTCTTTTGTCCTCTTATTACTTTCCTCCACTGTTGCTCCTCTACCCGCATTACCTTCCGATGCTCTTGCCTTACTTGCATTCAAATCCACTGCTGATCTCAACAACCACCTCCATTTCTATCCCCGTGACGCTTTCTGCAAATGGCAAGGTGTCCAATGCAATGCACATCATAAAGCACACCGTCTCATTCTTCACAGTTTAGATCTCGGTGGTGTTTTTGCTCCCCACACTTTGTCTCGTCTTGACCAGCTCCGCGTCCTTAGTCTGCAAAACAACTCTCTCACCGGACCCATTCCTGATCTCTCTGCCCTTTTCAATCTCAAAACCCTCTTCCTCGACAACAACTACTTCACCGGTTCTTTTCCTCCTTCCATACTCTCCCTCCACAGGCTTCGAACCTTGGATTTCTCCCACAACAACCTCTCTGGACCAATCCCCAACGCTTTAACCAAGCTCGACAGGTTCTACTACCTCCGTCTCTCCTCCAATAGATTCAATGGAACCATCCCTCCTCTCAATCAGTCCGCTCTCCGCACTTTCGACGTCTCTGCTAACAACCTCACCGGACCTATTCCTGTCACCCCAACTTTGGCCCGTTTTGGAccctcctctttctctctcaatcCAGCCCTCTGCGGTGAAATCATCCACAAAGAATGCCATCCTAGTGCCCCTTTCTTTGCACCAACGCCGCCGCTCATAACGGCGCCGCCGCCCGCGGTGGCGCTTGGTCAGAGTGCCCAGGTCAACGGCTTTATCCGTCCGCCCTACAGAAAAAAGCACAACAGAACCGCAGTGATTATCGGGTTCTCCGCTGGGGTTTTGGTCCTTATCGCCTCACTCGTGTGTCTGGTGGTGGCCGTGAAGAAACAGGGAGACAAGAAGGAGGCTTCTGGGCATATAATGGGTTCGGATGCGGCGGCGACGGCGGAGGCAGCGGCGGTAATGCAAATGGAGCAAGAGAAAGAATTGGAGGAGAAGGTGAAGAGGGTGCAAGGGATGCAAGTGGGGAAGAGTGGGAGTTTAATATTCTGTGCGGGAGAGGCTCAGTTGTATACGCTGGACCAACTGATGAGAGCCTCTGCGGAGCTATTGGGGAGAGGGTCGTTGGGGACCACGTACAAAGCGGTGTTGGATAACCGTCTGATTGTCACAGTGAAGCGGCTTGATGCTGCTAAAATGGCCGCGGATGCAAGCAAAGAGGTGTACGAGCGTCACATGGAATCAGTGGGTGGGCTTCGTCATCCCAATTTGGTGCCGCTTAGGGCCTATTTTCAGGCCAAGGAAGAAAGGCTTCTTATCTATGATTACCAGCCCAATGGCAGTCTTTTCTCCCTCATTCACGATAGAGCTAATTCTCATTCTAACCCTACTGCAAACATGTTTCCTCGATTTGCGCGTTGCcgttttaatttcaaaaaagtgCATTTGATTGATAACCAAAGTTCGAGATCAAGCAGGGCAAAGCCATTGCACTGGACGTCGTGCTTGAAGATAGCAGAGGACGTGGCTCAAGGACTGTCCTACATCCACCAAGCATGGAGACTGGTTCATGGCAATCTCAAATCCTCCAATGTTCTTCTTGGACCCGATTTCGAGGCGTGCATCACTGATTACTGCCTCTCCATGTTGGCCAACCCATCCAGTTTCCATGATGATCCTGATTCTTCAGCATACAGAGCTCCTGAGACTCGCAATCCCAGTCAGCAGCCAACCCCTAAGTCTGACGTTTACGCCTATGGTATTTTGTTGCTTGAACTTCTCACGGGGAAGCCTCCTTCACAGCACCCATTCTTGGTGCCCGCCGATAAGATAAGTTGGGCGAAATCAATGAGGGAAGATGGTGGAGGCGAAGACAATAGAATGGACATGCTTCTTGAGGTTGCTACTACCTGTAGCTTCACCTCTCCCGAGCAGAGGCCCACTATGTGGCAGGTCTTGAAGATGTTGCAGGAAATTAAAGAGATTGTATTATTGGAGGATACTCAATTGGACCCACGCACTGCCCTCTCTTGA 2073 0.4973 MPKPHHFPLPLHLQILLSHSFVLLLLSSTVAPLPALPSDALALLAFKSTADLNNHLHFYPRDAFCKWQGVQCNAHHKAHRLILHSLDLGGVFAPHTLSRLDQLRVLSLQNNSLTGPIPDLSALFNLKTLFLDNNYFTGSFPPSILSLHRLRTLDFSHNNLSGPIPNALTKLDRFYYLRLSSNRFNGTIPPLNQSALRTFDVSANNLTGPIPVTPTLARFGPSSFSLNPALCGEIIHKECHPSAPFFAPTPPLITAPPPAVALGQSAQVNGFIRPPYRKKHNRTAVIIGFSAGVLVLIASLVCLVVAVKKQGDKKEASGHIMGSDAAATAEAAAVMQMEQEKELEEKVKRVQGMQVGKSGSLIFCAGEAQLYTLDQLMRASAELLGRGSLGTTYKAVLDNRLIVTVKRLDAAKMAADASKEVYERHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHDRANSHSNPTANMFPRFARCRFNFKKVHLIDNQSSRSSRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACITDYCLSMLANPSSFHDDPDSSAYRAPETRNPSQQPTPKSDVYAYGILLLELLTGKPPSQHPFLVPADKISWAKSMREDGGGEDNRMDMLLEVATTCSFTSPEQRPTMWQVLKMLQEIKEIVLLEDTQLDPRTALS 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3531 690 Pfam Leucine rich repeat 125 184 IPR001611 GO:0005515
Sto9g3531 690 Gene3D Ribonuclease Inhibitor 37 192 IPR032675 -
Sto9g3531 690 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 18 681 - -
Sto9g3531 690 SUPERFAMILY L domain-like 62 212 - -
Sto9g3531 690 ProSiteProfiles Protein kinase domain profile. 378 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3531 690 Gene3D Transferase(Phosphotransferase) domain 1 495 682 - -
Sto9g3531 690 SUPERFAMILY Protein kinase-like (PK-like) 382 675 IPR011009 -
Sto9g3531 690 ProSiteProfiles Leucine-rich repeat profile. 102 124 IPR001611 GO:0005515
Sto9g3531 690 Gene3D Ribonuclease Inhibitor 193 243 IPR032675 -
Sto9g3531 690 MobiDBLite consensus disorder prediction 571 593 - -
Sto9g3531 690 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 681 - -
Sto9g3531 690 Pfam Protein kinase domain 381 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3531 690 Gene3D Phosphorylase Kinase; domain 1 356 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3531 Sto-Chr9 34388841 34391708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3531 39 683 Receptor kinase-like Gene Family AT5G43020 55.940 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto9g3531 Pkinase 3.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3531 - - cam:101511242 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3531 9 34388841 34391708 Sto9g3531 9 34388841 34391708 ECH