Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3521 ATGAAGAGGGCGGTTTCCGGCGACGGAGGCAGGCACgataagaagatgaagaaggcaAGGGTTGCAGAGGATGGAGGGTCAGAGTGTGTGTATTTTGATGAGAATGTGCTGTTCGAGGTGTTGAAGCACGTGGATGCGAAGACGCTGGCGATGGCGGCTTGTGTGAGCAAGGAGTGGCACAAGACGGCACAGGATGAGCGTTTGTGGGAGTTGATCTGCTCCAAGCACTGGCCTAACACCGGCTGTGCCCACCAACAATTGCGCTCCGTCGTGCTTGCGCTTGGTGGCTTCCGTCGTCTTCACTCGCTTTACCTCTGGCCACTCTCCAACCCCTCTTCCCCTTCCATCCCCACCCTCACGCCATCCACTCGCCTCGGCAAAGACGAGTTGCTGGATGAGTTTGCAAAAGAAATTCAGTCTTTGCCTTGGATGTGCGGAAATGTTAAGCCGGCAATTAATATTATGGCGTTCCTGAGttgttgttcttcttcttcattttgttcCATACCGATTATCCTTTTCATTTGGGGTTTGGCTTTCCATTGCTTAACTTCATCATCTTCCGCCAATACCTTGTCCCTGTCCGTGGAGAATCCAAAGGACGTTATAAATTCCAAAAACGGCATGTTCACTGCTGGCTTTCACGCCGTGGGTGATAATGCCTATTGCTTTGCCATCTGGTTCACCGAACCTCATGCCCAAGCCCAACACTTGACCCTGGTTTGGATGGCTAACCGCGACCAACCTGTCAACGGAAGGCTCTCAACCCTTACCCTCCGCCACACAGGTAATTTGGTCTTAAGCGATGCGggtcactctgatgtttgggccACCAACACCACCTCAACCGCTCCACTAATCTTGCTTCTCCATGATGATGGTAATCTTGTTCTACAAactcatcataatattattGTGTGGCAAAGTTTTGATTGCCCAACAGATACACTCCTCCCTACCCAATATCTCACCAGATACTCCACGCTTGTCTCTTCTACAACTCAAACTAACCGCTCCTCTGGTTTCTATAAGCTCTTTTTCGACAACGATAATATTCTCCGTCTTCTCTATGATGGCCCCGATGTTTCAAGTATTTACTGGCCAGATCCCTGGCTCGTTAGCTGGGAAGCTGGAAGGTCCACCTACAATGCCTCTCGACTTGCGTTTCTCAATTCCTACGGTAATTTTACTTCAACCGATGGTCTCACTTTCTTGACCTCTGATTTTGGTCCCATGCTAATCCAGAGAAGATTAACCCTCGATTCTGATGGTAATGTGCGTGTCTATGGTCGATCTAAATGGAGAGAAAAATGGTATGTCTCATGGGAAGCCAAATCTCAACCTTGCAAGATTCATGGGGTGTGTGGAGCCAACAGCGTGTGTACCTACCATCATCTCTCTGGTATCAAATGTTCTTGTCTTCCGGGTTACAAGGTTAAAAACGCAAGTGACTGGTCTTTAGGCTGTGACCCAAAATTCCATTTGTTGTCTTGCTCCAATTTAATTGATCATGAGTCTCGCTTTTTGCACATAGGCAATGCCGAGTTCTACGGCTACGACTATGGTTACTTCCAAAATTACACTTATAGCCAATGCCAAAATCAATGCTTAACATTGTGTAATTGCAAAGCCTTCCAATACACCTATGACCAGAAGAGTGGCACTTATCTTTGTTACACAAAGACCATGTTGCTCAATGGGTATCTTTCCCCCGGTTTCCATGGGTCAATTTACTTGAGACTTCCTAAATCTAGTAATTTCGATTTTGAAGAATCCGTGATGGAATGTAACGGTGTGACCTCCGTAAAGCTTGAGAGAGACTACACCTTGAGACACAACAAAGTTTTAGTGAAGGTGTTTCTATGGTTGGTATTGGCAATTGGAGGCTTTGAAATTGTTTGCATCTCTGTGGTTTGGTGTCTGTTGATGAGGACTCAGAAAAAGGGTGGTTCAGATGAACACAAGTACCATCTTATTGCAACTAGATTCAGAAGTTACAGCTACTCGGAGATGAAAAGGGCAACAAAAGGATTTAGTGAAGAGATCGGCAGGGGTGGTGGAGGAATCGTATATAAGGGTGTATTGCGGGACCAACGAGTTGCAGCAATCAAGAGACTGAACGAAGCTAAGCAAGGCGAAAGTGAGTTTTTGGCTGAAGTTAGTATAATTGGAAGGCTTAACCACATGAACTTGATTGAGATGTGGGGGTATTGTGCAGAGGGAAAGCATAGGTTGTTGGTGTATGAGTATATGGATAATGGTTCTTTGGCCCAAAATTTGGTGTCCAACACACTTGATTGGAGAAGAAGGTATAACATCGCCTTGGGAACGGCCAAAGCTCTAGCATATCTTCACGAGGAATGCTTGGAGTGGATTTTGCATTGCGATATAAAGCCTCAAAACATACTTCTGGATTCTAATTTTCAACCCAAGGTGGCAGATTTTGGATTGTCTAAGCTACTTAACAGGAATGATCTTAATAACTCAAGCTTCTCTGGGATTAGAGGAACAAGAGGTTATATGGCACCTGAGTGGGTTTTCAATTTTCCCATCACCTCCAAGGTGGATGTTTATAGCTATGGAATTGTTGTGTTGGAGATGGTTACCGGAAAAGGCCTAAGGGTTGACGGAGTAGAGTCACATCTAGTGGCATGGGTGAAGGAGAAAAAGAACAGAGGATCTCACAGTTGTACATCATGGGTGGAGGATATTATTGATTCTACTATAGAAGGAAGTTATGAcataaataaggttgaaattttggctACATTGGCCTTGGATTGTGTTGAGGAAGACAAGGATGCAAGACCCACAATGAGTCAAATAGTGGAGAGGCTCCAGAGTCCTGATATTGATTTGTAG 2862 0.4385 MKRAVSGDGGRHDKKMKKARVAEDGGSECVYFDENVLFEVLKHVDAKTLAMAACVSKEWHKTAQDERLWELICSKHWPNTGCAHQQLRSVVLALGGFRRLHSLYLWPLSNPSSPSIPTLTPSTRLGKDELLDEFAKEIQSLPWMCGNVKPAINIMAFLSCCSSSSFCSIPIILFIWGLAFHCLTSSSSANTLSLSVENPKDVINSKNGMFTAGFHAVGDNAYCFAIWFTEPHAQAQHLTLVWMANRDQPVNGRLSTLTLRHTGNLVLSDAGHSDVWATNTTSTAPLILLLHDDGNLVLQTHHNIIVWQSFDCPTDTLLPTQYLTRYSTLVSSTTQTNRSSGFYKLFFDNDNILRLLYDGPDVSSIYWPDPWLVSWEAGRSTYNASRLAFLNSYGNFTSTDGLTFLTSDFGPMLIQRRLTLDSDGNVRVYGRSKWREKWYVSWEAKSQPCKIHGVCGANSVCTYHHLSGIKCSCLPGYKVKNASDWSLGCDPKFHLLSCSNLIDHESRFLHIGNAEFYGYDYGYFQNYTYSQCQNQCLTLCNCKAFQYTYDQKSGTYLCYTKTMLLNGYLSPGFHGSIYLRLPKSSNFDFEESVMECNGVTSVKLERDYTLRHNKVLVKVFLWLVLAIGGFEIVCISVVWCLLMRTQKKGGSDEHKYHLIATRFRSYSYSEMKRATKGFSEEIGRGGGGIVYKGVLRDQRVAAIKRLNEAKQGESEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMDNGSLAQNLVSNTLDWRRRYNIALGTAKALAYLHEECLEWILHCDIKPQNILLDSNFQPKVADFGLSKLLNRNDLNNSSFSGIRGTRGYMAPEWVFNFPITSKVDVYSYGIVVLEMVTGKGLRVDGVESHLVAWVKEKKNRGSHSCTSWVEDIIDSTIEGSYDINKVEILATLALDCVEEDKDARPTMSQIVERLQSPDIDL 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3521 953 Gene3D Phosphorylase Kinase; domain 1 641 750 - -
Sto9g3521 953 CDD STKc_IRAK 689 947 - -
Sto9g3521 953 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 168 950 - -
Sto9g3521 953 SMART serkin_6 676 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3521 953 ProSiteProfiles Bulb-type lectin domain profile. 187 311 IPR001480 -
Sto9g3521 953 SUPERFAMILY Protein kinase-like (PK-like) 655 946 IPR011009 -
Sto9g3521 953 ProSiteProfiles PAN/Apple domain profile. 498 596 IPR003609 -
Sto9g3521 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672|GO:0006468
Sto9g3521 953 Gene3D - 192 312 IPR036426 -
Sto9g3521 953 CDD PAN_AP_plant 507 582 - -
Sto9g3521 953 Gene3D - 313 442 IPR036426 -
Sto9g3521 953 ProSiteProfiles EGF-like domain profile. 445 483 IPR000742 -
Sto9g3521 953 SMART blect_4 189 313 IPR001480 -
Sto9g3521 953 Pfam PAN-like domain 506 562 IPR003609 -
Sto9g3521 953 CDD B_lectin 203 313 IPR001480 -
Sto9g3521 953 ProSiteProfiles Protein kinase domain profile. 676 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3521 953 SUPERFAMILY alpha-D-mannose-specific plant lectins 236 370 IPR036426 -
Sto9g3521 953 Pfam F-box domain 35 70 IPR001810 GO:0005515
Sto9g3521 953 Gene3D - 31 98 - -
Sto9g3521 953 Gene3D Transferase(Phosphotransferase) domain 1 751 951 - -
Sto9g3521 953 SUPERFAMILY F-box domain 34 78 IPR036047 GO:0005515
Sto9g3521 953 ProSitePatterns Protein kinases ATP-binding region signature. 682 704 IPR017441 GO:0005524
Sto9g3521 953 Pfam D-mannose binding lectin 239 325 IPR001480 -
Sto9g3521 953 Pfam Protein kinase domain 679 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3521 953 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 168 950 - -
Sto9g3521 953 Pfam S-locus glycoprotein domain 412 480 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3521 Sto-Chr9 34334559 34341824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3521 666 946 Receptor kinase-like Gene Family AT3G58690 40.541 1.98e-61 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sto9g3521 Pkinase 1.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3521 - - jre:108987254 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3521 9 34334559 34341824 Sto9g3521 9 34334559 34341824 ECH