Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3516 ATGGCTGACAAAGAGAATTGCGTGAGGCTCACCCGTGCAGCCAAGAAGAGAGCCGCCCTTCCCCAACTGCAGCCTCCCACCAAGAAGCGTGTAGTTTTGGGAGAGCTCACCAACTTCTCTCATCTTGTGTCGCCCCAAGGGACGCTAACCCACAACACTCGAAGAATCACTAAGAGAGTCAGAAGAGAGCCACCCTCCACCACCGCCGCAACCTCTAATCTCATTGACACCGATCAAAGCTGGGATGATCCCCAAATGGCCGCCCCTTATGTTTCTGATATCTACCAGTATCTCCGCGACTTGGAGATGGATCCCAGACGAAGGCCCTTACCTGATTATATTAAGAAAGTTCAGAAAGATGTAAATGCTAACATGAGAGGTGTTCTGGTAGATTGGTTGGTTGAAGTTGCCGAGGAATACAAGCTTGTTTCAGATACTCTTTATCTTGCCGTTGCTTATATTGATAAGTTTCTATCTTTAAGTGCTCTAAATAGGCAGAAGCTGCAGTTATTGGGTGTTTCTTCGATGCTAATTGCCTCAAAGTACGAGGAGATTAAACCTCCTGTAGTAGAAGAGTTTTGTTACATTACGGACAACACATACACCAAGGAAGAGGTTGTGAAGATGGAGGCTGAAATACTTAAATCATTGAAATTTGAATTGGGAAGATTCTCTAGAGTTTCTCAGGAAAGTTATGAGACTTCTAATCTCCAGTTTGAGTTCCTTAGCTACTATCTTGCGGAGCTCAGTTTGTTGGATTATAATTGTGTAAAGTTCTTGCCTTCTTTGGTGGCTGCCTCGGTTGTCTTTCTAGCCAGATTTATGTTAAGCCCAAGCGTTCATCCTTGGAATTCCACGCTCCATGAACACTCAGGTTATGAACCATCCGACTTGAAGGAATGTGTTCTGATCATACATGACTTGTATCTACGTAGGAGAGGCGGGACTTTGCAATCTATAAGAGAGAAATATAGACAGCATAAGTTCAAATGTGTTGCAACAACGCCTTCTCCTCCGGAAATACCTCTTTCTTATTTTGAAGTTGGAGAGACAGATCATTAG 1062 0.4388 MADKENCVRLTRAAKKRAALPQLQPPTKKRVVLGELTNFSHLVSPQGTLTHNTRRITKRVRREPPSTTAATSNLIDTDQSWDDPQMAAPYVSDIYQYLRDLEMDPRRRPLPDYIKKVQKDVNANMRGVLVDWLVEVAEEYKLVSDTLYLAVAYIDKFLSLSALNRQKLQLLGVSSMLIASKYEEIKPPVVEEFCYITDNTYTKEEVVKMEAEILKSLKFELGRFSRVSQESYETSNLQFEFLSYYLAELSLLDYNCVKFLPSLVAASVVFLARFMLSPSVHPWNSTLHEHSGYEPSDLKECVLIIHDLYLRRRGGTLQSIREKYRQHKFKCVATTPSPPEIPLSYFEVGETDH 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3516 353 PANTHER CYCLINS 18 349 IPR039361 -
Sto9g3516 353 CDD CYCLIN 125 214 IPR013763 -
Sto9g3516 353 ProSitePatterns Cyclins signature. 126 157 IPR006671 -
Sto9g3516 353 Gene3D - 93 334 - -
Sto9g3516 353 CDD CYCLIN 214 306 IPR013763 -
Sto9g3516 353 PIRSF Cyclin_A_B_D_E 4 344 IPR039361 -
Sto9g3516 353 SUPERFAMILY Cyclin-like 81 221 IPR036915 -
Sto9g3516 353 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 18 349 - -
Sto9g3516 353 SUPERFAMILY Cyclin-like 224 340 IPR036915 -
Sto9g3516 353 SMART cyclin_7 219 307 IPR013763 -
Sto9g3516 353 SMART cyclin_7 131 215 IPR013763 -
Sto9g3516 353 SMART Cyclin_C_2 215 338 IPR004367 -
Sto9g3516 353 Gene3D - 109 222 - -
Sto9g3516 353 Pfam Cyclin, N-terminal domain 93 221 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3516 Sto-Chr9 34313230 34315529 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3516 1 347 Core Cell Cycle Gene Families AT5G43080 59.557 4.01e-148 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3516 K06627 - pvy:116125667 480.33