Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3496 atggATGAGAGTGCGGCGAGCCAAGAAAATGAAAGATGGCCAGAACAAGAGGTGGTAGATGAAGATTCATTTCTCCACTTAAATGATGATAGTGGTCCAGAGGATGAGTATGTGGACATTCTGATGGAGAGGGAGATCGCTCACGGATTCAAAAGGGATGAATCTTTGGTGTTTGGGAACTGCCTCAAAATTGCCCGCTTGGATGCTATCAATTGGATTCTCAAAACAAGAGCAACATTGGGTTTTCGGTTTCAAACAGCTTATTTGTGTGTTATGTACTTGGACGGATTCCTTTGCAGGCGGTCTATTGATAGTGAACAATTTTGGGCAATGCGGTTACTATCAGTGGCATGCCTCTCTCTGGCTGCAAAGATGGAGGAGTGCAACGTGCCGCCGCTTTCAGCGTTTCAATTACAAGACTACAGCTTCCACAGCAAAGCCATTCAGAGAATGGAGCTATTGGTTCTGAGCACATTGGAATGGAATTTACGTTTCATCACTCCCTTTCCTTTTCTTCCTTCTCTCATTAAAAACTTGTGCAACAAATCTCCCACCACTTTTCAAACCATCTTCACTACCCTCATCAAAGAGATCAATTCAATGGATCATAGACCGTCTGTTGTAGCAGCGGCGGCTACTTTGGTAGCATTGGATCAAGAATTGACAAGAGAAGCAGTACAGTTAAAGATGAGCTCAGTTTCTGGCTATAGGAATAGGATTCTTGAAACTGAAGAGATATACACCTGTTATAATCTAATACGGAGATTATACACGGAGAATACCAGAATAGACAAGTTTGTGCATTCCCCGAATCCATCACCCATACAGTCGAGGTCAGAGAGTTGTTCAGATACTTCTGCCGCTAGTGCTATCACCAAGAGAAGAAGACTTACATTCAAGGATCCTAAAGAAACTCCGGGCCCGCATGATTTTTGA 936 0.4306 MDESAASQENERWPEQEVVDEDSFLHLNDDSGPEDEYVDILMEREIAHGFKRDESLVFGNCLKIARLDAINWILKTRATLGFRFQTAYLCVMYLDGFLCRRSIDSEQFWAMRLLSVACLSLAAKMEECNVPPLSAFQLQDYSFHSKAIQRMELLVLSTLEWNLRFITPFPFLPSLIKNLCNKSPTTFQTIFTTLIKEINSMDHRPSVVAAAATLVALDQELTREAVQLKMSSVSGYRNRILETEEIYTCYNLIRRLYTENTRIDKFVHSPNPSPIQSRSESCSDTSAASAITKRRRLTFKDPKETPGPHDF 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3496 311 PANTHER CYCLINS 37 294 IPR039361 -
Sto9g3496 311 Gene3D - 158 292 - -
Sto9g3496 311 Pfam Cyclin, C-terminal domain 166 260 IPR004367 -
Sto9g3496 311 SUPERFAMILY Cyclin-like 34 163 IPR036915 -
Sto9g3496 311 CDD CYCLIN 66 156 IPR013763 -
Sto9g3496 311 PANTHER CYCLIN-D5-1 37 294 - -
Sto9g3496 311 MobiDBLite consensus disorder prediction 268 292 - -
Sto9g3496 311 Gene3D - 61 157 - -
Sto9g3496 311 SMART cyclin_7 71 157 IPR013763 -
Sto9g3496 311 MobiDBLite consensus disorder prediction 294 311 - -
Sto9g3496 311 SUPERFAMILY Cyclin-like 149 262 IPR036915 -
Sto9g3496 311 Pfam Cyclin, N-terminal domain 65 164 IPR006671 -
Sto9g3496 311 MobiDBLite consensus disorder prediction 268 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3496 Sto-Chr9 34213269 34214624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3496 9 256 Core Cell Cycle Gene Families AT4G34160 36.226 2.34e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3496 K18811 - gmx:100798728 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3496 9 34213269 34214624 Sto9g3496 9 34213269 34214624 ECH