Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3486 ATGGCTACTGTTGGTTCAacttctccatcttcttcatccttcccactatttgtgcttcttcttcttcttctttcatcacATGCAGAGGTTTATTCCAGTTCTGCAGCCTCTTACTCAACGACAGTTAAGTTTCTTCCTGGGTTTCAGGGGCCTCTTCCTTTCCATCTTGAAACTGGGTATGTGGGAGTGAGTGAATCAGAAGATGTGCAGTTATTCTACTACTTTTCCAAGTCTGAGAGGAATCCCAAAGAGGACCCTCTCATGCTCTGGCTTACTGGTGGCGCAGGTTGCTCTGCCTTGTCTAGTCTTGCCTTTGAAATAGGTCCCTTTAATTTTAGGATTGAGGAATATAATGGTAGCTTGCCTACCCTGCTTTCAAATCCACACTCATGGACTAAGGTTGCaagtattatttttgttgatttacCTGCTAATACTGGATTCTCCTATGCAAAACCTCCTGTTGCAATACAACAATTTCTCTCTAACCCCTTCTATGTTGGTGGGGATTCATATTCTGGGTTAATTGTACCTGCAGTTtcccttgaaattttaaaagGAAATGAGGACAGTGTAAAGTCTCCAATCAATTACCAGGGATACTTACTTGGAAACCCTACAACTGACGGTACCCAAGACGGCAATTTTAAGATTCCATTTGCTCATGGAATGGGTCTCATTCCTGATGAACTCTATCAGTCACTGAAGAGCAGTTGTGGAGGAGAGTATCAAAATGTAGATCCTAACAATGAAATGTGCGTGAGATCTATTGCCGCCTATGAGAAGTGTGTTTCAGGATTAAATGGTGCACATATTTTGGAGCCCAGTTGTCCATATCTTTCTCCAAAACCAGAAGAAGAATTTTTTGGCAGAAGATCTCTGGATGAAACATCCGAATCCTCACTCCTACTCACATCTGAACCTTCACTTCCTACAATAGGATGCCGACTTTATGAAGCTGTGCTTGCCACTCGTTGGGCCAATGATGATTGGGTTCAGAAGGCGCTTGGCATCCGTCagGCAAGTATAGGAAAATGGCAGCGATGTGTTCAAACCAACTATACTAGAGAAATTAACAGCAGTATTCCATTTCACGTGGAGTTGAGTAGTAAAGGTTATCGTGCTCTAGTATACAGTGGAGATCATGATTTTTTAGTTCCATTTTGTGGAACTGAAGCATGGATAAGATCTCTAAATTACAGCATTGTAGATGAGTGGAGGCCATGGTTAGTTCAGAGCCAAATTGCTGGTTACACAAGGACGTATTCAAATGGGATGACTTATGCGACTGTaaagGGTGGAGGGCACACAGCTCCCGAGTACAAACCCAGAGAATGCTTTGCAATGTTTGAGAGGTGGATTTCTCAGAAGCCACTCTAA 1380 0.3993 MATVGSTSPSSSSFPLFVLLLLLLSSHAEVYSSSAASYSTTVKFLPGFQGPLPFHLETGYVGVSESEDVQLFYYFSKSERNPKEDPLMLWLTGGAGCSALSSLAFEIGPFNFRIEEYNGSLPTLLSNPHSWTKVASIIFVDLPANTGFSYAKPPVAIQQFLSNPFYVGGDSYSGLIVPAVSLEILKGNEDSVKSPINYQGYLLGNPTTDGTQDGNFKIPFAHGMGLIPDELYQSLKSSCGGEYQNVDPNNEMCVRSIAAYEKCVSGLNGAHILEPSCPYLSPKPEEEFFGRRSLDETSESSLLLTSEPSLPTIGCRLYEAVLATRWANDDWVQKALGIRQASIGKWQRCVQTNYTREINSSIPFHVELSSKGYRALVYSGDHDFLVPFCGTEAWIRSLNYSIVDEWRPWLVQSQIAGYTRTYSNGMTYATVKGGGHTAPEYKPRECFAMFERWISQKPL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3486 459 Pfam Serine carboxypeptidase 158 456 IPR001563 GO:0004185|GO:0006508
Sto9g3486 459 Pfam Serine carboxypeptidase 46 155 IPR001563 GO:0004185|GO:0006508
Sto9g3486 459 Gene3D - 316 459 - -
Sto9g3486 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 159 458 IPR001563 GO:0004185|GO:0006508
Sto9g3486 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 17 156 IPR001563 GO:0004185|GO:0006508
Sto9g3486 459 Gene3D alpha/beta hydrolase 157 279 IPR029058 -
Sto9g3486 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 139 IPR001563 GO:0004185|GO:0006508
Sto9g3486 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 150 IPR001563 GO:0004185|GO:0006508
Sto9g3486 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 178 IPR001563 GO:0004185|GO:0006508
Sto9g3486 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 426 439 IPR001563 GO:0004185|GO:0006508
Sto9g3486 459 PANTHER CARBOXYPEPTIDASE, PUTATIVE-RELATED 17 156 - -
Sto9g3486 459 PANTHER CARBOXYPEPTIDASE, PUTATIVE-RELATED 159 458 - -
Sto9g3486 459 Gene3D alpha/beta hydrolase 35 156 IPR029058 -
Sto9g3486 459 SUPERFAMILY alpha/beta-Hydrolases 42 458 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3486 Sto-Chr9 34161067 34163884 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3486 36 80 Calmodulin-binding Proteins AT2G22960 48.889 5.19e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3486 K16296 - cit:102630827 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3486 9 34161067 34163884 Sto9g3486 9 34161067 34163884 ECH