Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto9g3484 | ATGGATGCAAAACAGGCAAGTATAGGAAAATGGGAGCGATGTTTTCAAACCAACTATACTAAAGAAATTAACAGCAGTATTCCATTTCACGTGGAGTTGAGTAGTAAAGGTTATCGTGCTCTAGTATACAGACTTAAAGATGCTGATGCTTTCTGTGATGGCAGTGGAGATCATGATCTTATAGTTCCATTTTGTGGAACTGAAGCATGGATAAGATCTCTAAATTACAGCATTGTAGATGAGTGGAGGCCATGGTTAGTTCAGAGCCAAATTGCTGGTTACACAAGGACGTATTCAAATGGGATGACTTATGCGACTGTaaagGGTGGAGGGCACACAGCTCCCGAGTACAAACCCAGAGAATGCTTTGCAATGTTTGAGAGGTGGATTTCTCAGAAGCCACTCTAA | 408 | 0.4118 | MDAKQASIGKWERCFQTNYTKEINSSIPFHVELSSKGYRALVYRLKDADAFCDGSGDHDLIVPFCGTEAWIRSLNYSIVDEWRPWLVQSQIAGYTRTYSNGMTYATVKGGGHTAPEYKPRECFAMFERWISQKPL | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto9g3484 | 135 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 5 | 134 | IPR001563 | GO:0004185|GO:0006508 | |
| Sto9g3484 | 135 | SUPERFAMILY | alpha/beta-Hydrolases | 8 | 135 | IPR029058 | - | |
| Sto9g3484 | 135 | Pfam | Serine carboxypeptidase | 6 | 132 | IPR001563 | GO:0004185|GO:0006508 | |
| Sto9g3484 | 135 | PANTHER | CARBOXYPEPTIDASE, PUTATIVE-RELATED | 5 | 134 | - | - | |
| Sto9g3484 | 135 | Gene3D | - | 1 | 135 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto9g3484 | Sto-Chr9 | 34155557 | 34156199 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto9g3484 | 1 | 135 | Calmodulin-binding Proteins | AT2G22960 | 58.088 | 7.99e-53 | 163 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto9g3484 | K16296 | - | egr:104449249 | 191.045 |