Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3483 ATGAAGAAGGGCGAGAGGGCTATTATAAGGATACATCCTGATTATGCATTTGGTAATGTTGAAGCAAGGTGTGATTTGGCAGTTGTTCGACCAGGGTCCACAGTTGTCTATGAAGTTGAGATGATGGATTTTGTTAAGgagaaAGCACCATGGGAGTTGAATAATGATGAGAAAATTGAGGCAGCTGggaggaagaaagaagaaggaaatgTGTTATTTAAAAATGGCAAGTATCAGAGAGCAGGGAAGAAGTACGACAAAGCTGCTGATTATGTTAGTGAAGATGGGTCTTTTGGGGATGACGAGCAAAAGCTAGCTAAGGCACTAAGAGTGTCGTGCTGGTTGAATGGTGCAGCATGTAGCCTCAAACTTCACGACTTTTCAGGAGCGATCAAGTTATGCTCTCAGGTGCTTGATGTTGAGTTCTGCAATGTAAAAGCTTTGTACAGACGGGCGCAAGCATATATTGAAACCAAAGACTTTCTTTTGGCAGATGTTGACATCAAGAAAGCTCTTGAGGTGGACCCACAAAACAGGGAGTTAAAGGCGATTCAGAGGAAATTGAAACAACTTCAAGCTGAGAGTGACAAAAGAGATGCTAAGCTCTATGCAAATATGTTTGCACATAATACGAAAGACTCGGCTGTGGCATCAAAGAGAATGAAGGTTGAGATAACTGAGGATGAAAGGAAAGATGAAGAGGtgatgggaatggaaatggacaAAGTTGCTGATAGTTCAGCTCCTCCAGACGGTGGTTAG 762 0.3976 MKKGERAIIRIHPDYAFGNVEARCDLAVVRPGSTVVYEVEMMDFVKEKAPWELNNDEKIEAAGRKKEEGNVLFKNGKYQRAGKKYDKAADYVSEDGSFGDDEQKLAKALRVSCWLNGAACSLKLHDFSGAIKLCSQVLDVEFCNVKALYRRAQAYIETKDFLLADVDIKKALEVDPQNRELKAIQRKLKQLQAESDKRDAKLYANMFAHNTKDSAVASKRMKVEITEDERKDEEVMGMEMDKVADSSAPPDGG 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3483 253 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 1 41 IPR001179 GO:0003755
Sto9g3483 253 PANTHER PEPTIDYLPROLYL ISOMERASE 34 230 - -
Sto9g3483 253 SUPERFAMILY FKBP-like 1 62 - -
Sto9g3483 253 SUPERFAMILY TPR-like 57 207 IPR011990 GO:0005515
Sto9g3483 253 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 45 IPR001179 GO:0003755
Sto9g3483 253 ProSiteProfiles TPR repeat profile. 145 178 IPR019734 GO:0005515
Sto9g3483 253 Gene3D - 1 50 IPR046357 GO:0003755
Sto9g3483 253 SMART tpr_5 111 144 IPR019734 GO:0005515
Sto9g3483 253 SMART tpr_5 62 95 IPR019734 GO:0005515
Sto9g3483 253 SMART tpr_5 145 178 IPR019734 GO:0005515
Sto9g3483 253 Coils Coil 174 201 - -
Sto9g3483 253 Gene3D Tetratricopeptide repeat domain 51 205 IPR011990 GO:0005515
Sto9g3483 253 MobiDBLite consensus disorder prediction 229 253 - -
Sto9g3483 253 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 34 230 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3483 1 208 Calmodulin-binding Proteins AT3G25230 56.731 5.80e-77 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3483 K09571 - gmx:100798382 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3483 9 34147655 34149865 Sto9g3483 9 34147655 34149865 ECH