Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3473 ATGAGACTCGGTGTAGCTACAATACAAAACCAGTTTCAAGAGATTGAGACTTGGGATCCTAGTCATCTCGCAACTTTGTACCTCTGCCCTAATTCTCATCCCACCATGTGTCCACTGATGAGTTACGATGTTGGGGAAAACACAGCGCTAATAGCCTCTCATTTTCCTTTGTCTGCCATGCCCCTCAAGTCCGATGGCTCGCTGGGCATAATGGAAGCTCTAGGAAGGAGTAGGTGTAGGAAAGCAGAGGACGGCCTCTACTATTCCCAAACCCAAACTAATGCCACCACCAACGTCAACATCCTCCAATCCCACCAACAACCTCTGCTGCAATCAGAAAAGAGACCCTCTGCTCCTAAGTTGCCCTACAACCTCCCTCTCCCTGCCAAATCTAATCACAGATCCTCCCAGTACAGAGGCGTCACCAGACACCGATGGACTGGTAGATACGAGGCCCATTTGTGGGATAACACTTGCAAGAAACAGGGCCAGACTAAAAAGGGAAGACAAGGGGGATATGATAAAGAAGAGAAAGCTGCAAGAGCCTATGATCTTGCGGCTCTTAAGTACTGGGGACCTTCAACCCATACAAACTTtgcgTTGGAAAATTACCAAGCAGAAATGGAGGAAATGAAGAATATGAATCGGCAGGAATACGTAGCCCACTTGAGAAGAAAAAGTAGTGGGTTTTCGAGGGGAGCTTCAATGTACAGAGGAGTGACAAGTGAAGAGTTAGCAGCGGAAGCATACGACATAGCTGCAATAAGATTTCGGGGAGTGAATGCGGTGACTAACTTTGACACTTGTGGGGAATTGGGGATACCATACCATCCTGAAAGCAATGATTTTATTGCGTTGCTGAATGAGATTGAGGTAGAATGA 882 0.466 MRLGVATIQNQFQEIETWDPSHLATLYLCPNSHPTMCPLMSYDVGENTALIASHFPLSAMPLKSDGSLGIMEALGRSRCRKAEDGLYYSQTQTNATTNVNILQSHQQPLLQSEKRPSAPKLPYNLPLPAKSNHRSSQYRGVTRHRWTGRYEAHLWDNTCKKQGQTKKGRQGGYDKEEKAARAYDLAALKYWGPSTHTNFALENYQAEMEEMKNMNRQEYVAHLRRKSSGFSRGASMYRGVTSEELAAEAYDIAAIRFRGVNAVTNFDTCGELGIPYHPESNDFIALLNEIEVE 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3473 293 Pfam AP2 domain 137 192 IPR001471 GO:0003700|GO:0006355
Sto9g3473 293 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 38 80 - -
Sto9g3473 293 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 133 242 - -
Sto9g3473 293 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 244 268 - -
Sto9g3473 293 MobiDBLite consensus disorder prediction 112 139 - -
Sto9g3473 293 CDD AP2 136 200 IPR001471 GO:0003700|GO:0006355
Sto9g3473 293 Gene3D AP2/ERF domain 211 268 IPR036955 GO:0003700|GO:0006355
Sto9g3473 293 Gene3D AP2/ERF domain 136 202 IPR036955 GO:0003700|GO:0006355
Sto9g3473 293 ProSiteProfiles AP2/ERF domain profile. 203 267 IPR001471 GO:0003700|GO:0006355
Sto9g3473 293 PRINTS Ethylene responsive element binding protein signature 138 149 IPR001471 GO:0003700|GO:0006355
Sto9g3473 293 PRINTS Ethylene responsive element binding protein signature 249 269 IPR001471 GO:0003700|GO:0006355
Sto9g3473 293 SMART rav1_2 214 273 IPR001471 GO:0003700|GO:0006355
Sto9g3473 293 SMART rav1_2 137 206 IPR001471 GO:0003700|GO:0006355
Sto9g3473 293 Coils Coil 201 221 - -
Sto9g3473 293 ProSiteProfiles AP2/ERF domain profile. 137 200 IPR001471 GO:0003700|GO:0006355
Sto9g3473 293 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT ISOFORM X1 38 80 - -
Sto9g3473 293 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT ISOFORM X1 244 268 - -
Sto9g3473 293 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT ISOFORM X1 133 242 - -
Sto9g3473 293 SUPERFAMILY DNA-binding domain 136 201 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3473 Sto-Chr9 34087416 34091878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3473 38 267 AP2-EREBP Transcription Factor Family AT1G72570 49.064 4.40e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto9g3473 AP2 1.3e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3473 K09285 - sspl:121766256 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1072 5 7242500 7245692 Sto9g3473 9 34087416 34091878 CCT
Sto9g3473 9 34087416 34091878 Sto9g3473 9 34087416 34091878 ECH