Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3472 ATGGGTGGTCATGAAAATGCCATGGGGTTCCAACATAGAAACGAGAGCATTCTGAATTGTCCATCATCAGGTTTGACCACCAATGTTTCTGATTTATGCAATCCTTTTCTTGGTTTATCTGCTTGGGACCCATTCACTCACACTCAAAGCTTTGGAGGCTCTTCAATGGTTTCTCATACTGAGCTTCCTAACTCATCTTACCCGATTGTTTTGGAAAATCAGGGATTGAGTAGCACCTCTCATCTTGTTCAATACATGTCTGACTCAAATTATGTAGACATTGTACCAAAGGTTCCTTCCTATGCAAGTGGGAGCTTCTCAGAAATGGCTAACAGTAACACAGGGTATGTGTCAAACAAGGATTCAGGCATTGAAAGGACTGCAATAAATGATGATGCACAATCTCAGGGTGACAATTCCACCCCTGAAGATGGAGTCACTGCATCTGTACCTAATGGAAGTAGAAGAAAGCGAGAGCTTCATTATAATTCTACGTTCAATCCTAATATGAGTGCTGAAGTGGGAGCACCGAAGGATTCATCTGACAAGAGCTCAGATGGTGTGAAAGAACAAGATGAAAAGAAACCAAAATTAGATCAAAATACGAAAGCAGATTTGCGTGGTAAGCAAGCAAAAGACAGCTCACACAGTGGAGGAGAAACTCCCAAAGAAAATTTCATTCATGTGAGAGCTCGTAGAGGTCAAGCCACAAACAGTCATAGCCTTGCAGAAAGGGTAAGAAGAGAAAAGATAAGTGAGCGAATGAGACTACTTCAAGAACTTGTTCCGGGATGCAACAAGATAACTGGCAAAGCAGTAATGCTGGATGAGATTATTAACTATGTGCAGTCACTGCAACAACAGGTTGAGTTTTTGTCCATGAAACTTGCAACTGTGAACCCAGAACTGAATTTTGATGTGGACAGGATCCTATCCAAAGATATTCTGCAGTCACACGTTGGAAATGGAGCAATTGGTGGATACAGTGTTGGTATCATCAACTCCACTCACCTTTTCCCCAGTGGAAGTTACCATGGAAGCATACCCAACACATCACCACATATCCCTCCTTTGCCTCAGATTGTGATGGACCATGAGCTCCAAAGCTTATATGGAATGGGATACGATTCCAGTACAGCTCTACAAAATATGGGACCTAATGCCATTGTATGTTTAGAGTTATATATCAGTCAACTTGTTCACCAATCAAGTCTAGACCAACTAACAAGAAGGATATCCCTTGGAATAGCAAGAAGTAGAAGTGGATTCCCTGAGCAGACAGGAGACTCCTTGCTGATGCTGTTAGAAGCAAGAAGGCCAAAGCAAGCTCCTTCAAGTATATTCTGTtatgtttcttcttctttgatGCCTTCTGCTCCTCTCGCTGCATTACCTCCTTCATTTCCTCGAGATCAGGCTCCGAAGCTCCTCTTTGATGCCTGGGACTTTTCTGAACCAATGCAACAAGATCACCCTCTGAGGAACGGCCAGATTTCTTCGTCACAACCCACTCATACGCACTACCAAGCTGGAATAAGCCAGAGATCATGGCATTGA 1557 0.4252 MGGHENAMGFQHRNESILNCPSSGLTTNVSDLCNPFLGLSAWDPFTHTQSFGGSSMVSHTELPNSSYPIVLENQGLSSTSHLVQYMSDSNYVDIVPKVPSYASGSFSEMANSNTGYVSNKDSGIERTAINDDAQSQGDNSTPEDGVTASVPNGSRRKRELHYNSTFNPNMSAEVGAPKDSSDKSSDGVKEQDEKKPKLDQNTKADLRGKQAKDSSHSGGETPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVDRILSKDILQSHVGNGAIGGYSVGIINSTHLFPSGSYHGSIPNTSPHIPPLPQIVMDHELQSLYGMGYDSSTALQNMGPNAIVCLELYISQLVHQSSLDQLTRRISLGIARSRSGFPEQTGDSLLMLLEARRPKQAPSSIFCYVSSSLMPSAPLAALPPSFPRDQAPKLLFDAWDFSEPMQQDHPLRNGQISSSQPTHTHYQAGISQRSWH 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3472 518 CDD bHLH_AtBPE_like 225 310 - -
Sto9g3472 518 SMART finulus 241 291 IPR011598 GO:0046983
Sto9g3472 518 MobiDBLite consensus disorder prediction 490 518 - -
Sto9g3472 518 Pfam Helix-loop-helix DNA-binding domain 238 286 IPR011598 GO:0046983
Sto9g3472 518 MobiDBLite consensus disorder prediction 131 245 - -
Sto9g3472 518 Gene3D - 232 306 IPR036638 GO:0046983
Sto9g3472 518 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 233 303 IPR036638 GO:0046983
Sto9g3472 518 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 11 389 IPR024097 GO:0006355
Sto9g3472 518 MobiDBLite consensus disorder prediction 179 230 - -
Sto9g3472 518 MobiDBLite consensus disorder prediction 489 518 - -
Sto9g3472 518 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 11 389 - -
Sto9g3472 518 MobiDBLite consensus disorder prediction 131 148 - -
Sto9g3472 518 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 235 285 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3472 Sto-Chr9 34078395 34082517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3472 1 394 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 42.469 7.10e-79 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto9g3472 HLH 5.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3472 - - gmx:100801930 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3472 9 34078395 34082517 Sto9g3472 9 34078395 34082517 ECH