Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3432 ATGGAGGGAATCAGAGTAAAAGAGGAGGAAACCATAACATGTGCTGGTGGTTCGTCATCTTCGTCTTCGAGCTTATCTCCTCAGCCTATGGAGGGGCTACACGAGATGGGTCCTCCTCCATTTCTTACCAAGACCTTCGAAATGGTGGAGGATCCATCCACTGACTCTATAGTTTCTTGGAGCATATCTCGTAACAGCTTCGTTGTCTGGGACTCTCACAAGTTCTCCACCACCATTCTTCCTCGCTACTTCAAGCACAGTAATTTCTCCAGCTTCATTCGCCAACTCAATACCTATGGTTTTAGAAAAATTGATCCTGATCGATGGGAATTCGCAAACGAAGGGTTTTTGGGAGGACAGAAGCACTTATTGAAGACCATCAAGAGAAGAAGGAATGTGTCACAGAGTTCACAACAGCAAGGAGGAGGTGCTTGTGTTGAATTAGGGCAATATGGATTGGAAGGTGAGCTTGACAGGTTGAGAAGAGACAGGACAGTGTTAATGGCAGAAATTGTGAGGCTGAGGCAGCAACAGCTGAACTCACGGGAGCAAGTGCTTGCCATGGAGACAAGATTACAAACAACAGAGAAGAAGCAGCAACAGATACTCACTTTCCTCGCCAAAGCACTAAACAACCCAACCTTTATACAACAGTTTGTGCAGAGAAACGCCCAGAACAGAGAATTACAAGGTGTTGAGATTAGGCGAAAGAGGAGACTAACTGCTAGCCCAAGTTTGGAGAATTCACAAGAAGACCCTGTGATGGTGGCAGTGCCTAGCAAACCGGTGGTGGACTTTCCTATTCCAAGACAAGAACAAGAAGAATTGGCAACGATGGAGACTGAGATAGAGACCTTTTTTTCAACTCCTTATGATAATGAATCAAGTAGTGATATTAAAGAGCCAGTGTCAAGTTCAATTCCAACAGGCAGTGGGAGCAATTTGGGTTCAATGAGTGATGCTATCTGGGAGGATCTGCTGAACGAAGATTTAATCAGTGGGAATCCAGAGGAGGAAGTCATAATTGGTGATTATTCCCATAGTGATGCACCTGTGGATCACTTGGTAGCAAAACACAGTGATGAGTGGGCTGAGGGCTTGCAGGACATAGTGGATCAAATGGGTTATCTTGGGTCTAAACCATAG 1146 0.4511 MEGIRVKEEETITCAGGSSSSSSSLSPQPMEGLHEMGPPPFLTKTFEMVEDPSTDSIVSWSISRNSFVVWDSHKFSTTILPRYFKHSNFSSFIRQLNTYGFRKIDPDRWEFANEGFLGGQKHLLKTIKRRRNVSQSSQQQGGGACVELGQYGLEGELDRLRRDRTVLMAEIVRLRQQQLNSREQVLAMETRLQTTEKKQQQILTFLAKALNNPTFIQQFVQRNAQNRELQGVEIRRKRRLTASPSLENSQEDPVMVAVPSKPVVDFPIPRQEQEELATMETEIETFFSTPYDNESSSDIKEPVSSSIPTGSGSNLGSMSDAIWEDLLNEDLISGNPEEEVIIGDYSHSDAPVDHLVAKHSDEWAEGLQDIVDQMGYLGSKP 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3432 381 Pfam HSF-type DNA-binding 41 130 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto9g3432 381 ProSitePatterns HSF-type DNA-binding domain signature. 80 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto9g3432 381 SMART hsfneu3 37 130 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto9g3432 381 MobiDBLite consensus disorder prediction 1 37 - -
Sto9g3432 381 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 19 335 - -
Sto9g3432 381 MobiDBLite consensus disorder prediction 290 312 - -
Sto9g3432 381 PRINTS Heat shock factor (HSF) domain signature 41 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto9g3432 381 PRINTS Heat shock factor (HSF) domain signature 79 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto9g3432 381 PRINTS Heat shock factor (HSF) domain signature 92 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto9g3432 381 MobiDBLite consensus disorder prediction 13 29 - -
Sto9g3432 381 Coils Coil 157 177 - -
Sto9g3432 381 Gene3D - 34 131 IPR036388 -
Sto9g3432 381 SUPERFAMILY "Winged helix" DNA-binding domain 37 130 IPR036390 -
Sto9g3432 381 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 19 335 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3432 Sto-Chr9 33851288 33852990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3432 27 381 HSF AT2G26150 54.342 2.36e-129 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Sto9g3432 HSF_DNA-bind 9.7e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3432 K09419 - qsu:112015615 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1022 5 6862585 6863688 Sto9g3432 9 33851288 33852990 CCT
Sto9g3432 9 33851288 33852990 Sto9g3432 9 33851288 33852990 ECH