Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3423 ATGTCGACGGTGTACGTGTTAGAACCGCCGACCAAAGGGAAGGTGGTATTGAACACGACGCACGGTCCGCTTGATTTTGAGCTCTGGCCCAAGGAGGCCCCCAAGGCCGTCAGGAACTTCGTGCAGCTCTGCCTTGAAGGCTACTACAATAACACCATCTTCCACCGTATTATCAAGGACTTTCTTATCCAGGGTGGCGATCCCACTGGCACTGGCACAGGGGGTGAAAGTATTTATGGGAGTGTGTTCTCTGATGAATTTCATTCACGTCTAAGATTTAAGCATAGAGGTTTAGTTGCAATGGCTAATGCTGGATCACCACATTCCAATGGGAGTCAGTTTTTCATAACTCTGGATCGTTGTGATTGGCTTGATCGGAAGCATACAATTTTTGGAAAGGTGACAGGAGATACACTATATAACCTTTTGAGACTGGGTGAACTTGAAACTGATAAGAATGACCGGCCTTTAGATCCCCCCAAGATATTCTCAGTTGAGGTATTATGGAACCCATTTGATGATATTGTTCCAAGAACAGTTCAGCCTCAGATCCAAACGTCAACTGATACAGACAATAAAGATTCCAAGAAAAAAACTGTAAAAAAACTGAACTTGCTTTCATTTGGAGAAGAAGCTGAAGAAGAGGAAAAAGAATTGGCATCTCTGAAGCAAAAAATTAAGAGCAGTCATGATGTATTGGATGATCCTCGTCTTCTAAAGGAAGCAACTCCTAATAATGAATTGGGCTCATCTGGTGGAAAGTTAACAAGAGATGTGCAGTTATCTGTAAGGGATGCACTAAGCTCAAAGAAAGAAGAAATGCGCTCTCAAATACTACAAAAGCGGAAAGAGTTGGGGGATCTACCACCCAAGCCAAAGTTGCGAAATGGAAGCTCTAGTCCGAAGAAACATGATACGTCAGCAGCCAGGTCAAATGTTAGAAGTGTTGATGATGATCAACCTAGGATGGAGAAATTGTCCATGAAGAAAAAAGGAATAGGATCAGAAGCAAGAGCTGAACGAATGGCTAATGCAGATGCTGATTTACAATTGTTGAATGAAGCTGAAAAAGGAAGACAGCTTCAGAAGCAGAAGAAACGGAGACTTCAAGGACGTGAAGATGAAGTTCTAGCAAAACTAGAGAAATTTAAAAAGGCTTTGTCAGAAAAGACCAAACCCACAACTGATGGATCTGGAGATGTTACTGATGAGGATTTGACTGACTGGAGAAACGTTGACCTAAAATTTGCACCTGAGGCTGGCAAGGATCGCATGTCTCGCAATGATGACCCTAATGACTACGTTGTGCATGACCCTCTTTTGGAGAAGGGGAAAGAGAAGTTCAATAGGATGCAAGCCAAACAAAAGAGACGAGAACGAGAGTGGGCTGGGAAATCCCTTACTTGA 1407 0.43 MSTVYVLEPPTKGKVVLNTTHGPLDFELWPKEAPKAVRNFVQLCLEGYYNNTIFHRIIKDFLIQGGDPTGTGTGGESIYGSVFSDEFHSRLRFKHRGLVAMANAGSPHSNGSQFFITLDRCDWLDRKHTIFGKVTGDTLYNLLRLGELETDKNDRPLDPPKIFSVEVLWNPFDDIVPRTVQPQIQTSTDTDNKDSKKKTVKKLNLLSFGEEAEEEEKELASLKQKIKSSHDVLDDPRLLKEATPNNELGSSGGKLTRDVQLSVRDALSSKKEEMRSQILQKRKELGDLPPKPKLRNGSSSPKKHDTSAARSNVRSVDDDQPRMEKLSMKKKGIGSEARAERMANADADLQLLNEAEKGRQLQKQKKRRLQGREDEVLAKLEKFKKALSEKTKPTTDGSGDVTDEDLTDWRNVDLKFAPEAGKDRMSRNDDPNDYVVHDPLLEKGKEKFNRMQAKQKRREREWAGKSLT 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3423 468 MobiDBLite consensus disorder prediction 354 373 - -
Sto9g3423 468 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
Sto9g3423 468 Coils Coil 205 232 - -
Sto9g3423 468 CDD cyclophilin_CeCYP16-like 8 179 - -
Sto9g3423 468 PANTHER SPLICEOSOME-ASSOCIATED PROTEIN CWC27 HOMOLOG 5 207 - -
Sto9g3423 468 MobiDBLite consensus disorder prediction 307 341 - -
Sto9g3423 468 MobiDBLite consensus disorder prediction 235 256 - -
Sto9g3423 468 Coils Coil 264 284 - -
Sto9g3423 468 SUPERFAMILY Cyclophilin-like 14 180 IPR029000 -
Sto9g3423 468 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 5 207 IPR044666 -
Sto9g3423 468 MobiDBLite consensus disorder prediction 280 341 - -
Sto9g3423 468 MobiDBLite consensus disorder prediction 417 468 - -
Sto9g3423 468 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Sto9g3423 468 Gene3D - 2 182 IPR029000 -
Sto9g3423 468 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Sto9g3423 468 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Sto9g3423 468 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Sto9g3423 468 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Sto9g3423 468 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Sto9g3423 468 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 167 IPR002130 GO:0000413|GO:0003755
Sto9g3423 468 Coils Coil 352 372 - -
Sto9g3423 468 MobiDBLite consensus disorder prediction 388 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3423 Sto-Chr9 33812367 33815976 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3423 9 172 U-box Gene Family AT5G67530 50.610 5.67e-47 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3423 K12737 - gmx:100793148 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3423 9 33812367 33815976 Sto9g3423 9 33812367 33815976 ECH