Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3420 ATGGAAGATCTCGAGGAGGAAGAGAAAGTACAAGAGGAGGTCTTGGGGTCGAGCTTGACCATGGAGAAGGTCGCCGCGGCCAAGAAGTTCATAGAGAATCACTATAGGAATCAGATGAAGAACATCCAACAGCGAAAGGAGAGaCGTTGGATTTTAGAAAGGAAGCTAGCTTCCTCAGATGTGCCAAATGAGGAACGGATCAACCTCATCAAAGATTTAGAGCGAAAGGAGACAGAGTATATGCGATTGAAAAGGCACAAGATATGCGTTGATGATTTTGAGCCTTTAATCATCATTGGAAGAGGGGCCTTTGGGGAGGTTAGATTGTGTCGGGAGAAGAAATCTGGAAACATTTATGCCATGAAAAAGCTGAAGAAATCTGAGATGCTTAAGCGAGGCCAGGTGAAATCTGTAATTGATTGCATACAACTGAAGTCAGAAACCATAATGGATGTGGAACATGTTAGAGCTGAGAGGAACTTGTTGGCTGAAGTTGCCAGCCATTGCATAGTAAAACTTTACTACTCATTTCAGGATGCTGACTACTTGTATTTAATTATGGAATATCTGCCTGGGGGTGACATGATGACTCTGCTGATGAGAGAAGACACTTTAAGTGAAAGTGTTGCTAAGTTCTACATTGCACAGAGTGTTCTAGCCATAGAGTCTATTCATAAACACAATTACATTCACAGAGATATTAAACCAGATAATCTACTGCTGGATATAAATGGGCACATGAAACTCTCAGATTTTGGCCTCTGTAAGCCTCTCGATTGTAATACCCTGTCTACACTTCACGAGAATCAGACCATGGATGATGAAAATTTGGCAGAGCCAATGGATATTGATGGATGTTTTCCTGATGCGGACAACCAGAAAAGCTGGAGAAGTCCACGTGAGCAACTTCAGCATTGGCAGATGAACAGGAGGAAGTTGgaatttaaaagtTGCAAAAGGGAAAGTTTTGAATTCTGGAAACTATGGGCTCCCATGCGATTATGTTGCTCTGCCTCTGTGCAGAATAGCGTAACTAGAAAAGAAGATCTTTCTCACATTGCCCCTTTTCCACTTTGCAAGGCATTTTCTACGGTGGGAACACCAGACTACATTGCTCCTGAAGTACTGCTGAAAAAAGGATATGGAATGGAATGTGACTGGTGGTCGCTCGGAGCAATATTGTACGAAATGCTGGTTGGTTACCCTCCATTTTACTCTGATGACCCAATAACCACATGCAGAAAGATTGTTCATTGgagaaatcatttaaaatttccAGAAGATGCACAGTTGACACTTGAAGCCAAGGATCTAATATGCAGATTGCTGTGTGATGTTGAACATAGGTTAGGTACTCATGGGGCAAAAGAAATCAAGGCTCATCCTTGGTTTAAGGATGTGGAATGGGATAAACTGTATGAAACGGAGGCAGCATTCAAACCACAAGTCAATGGAGAGCTGGACACCCAAAACTTCATGAAATTTGATGAAgtagATCCACCTACAGCAGCAAGAACTGGGTCAGGTCCATCACGAAAGATGCTACTAACTCCCAAAGATATAAACTTTGTTGGTTATACCTACAAGAACTTTGATGCTGTGAAAGGGCTACGCCAGTCTTTTGCATCCATGCATTCAGTATTCAATATGAAGTATGAGAACTCCGTTGGAAACCCGATTATTCTTGTAGTGAGGACAACTGACGAACCTAAACGTTTCCGAAACCCTTGTGAAGGTTATCACTTATCAATAGGTGATTCCATGAAAGATTACTCTTCTAAACGGGCAGCTGAGGAGACAGGTTTACAAATGCTTGCATCGTCTGGAGATCCCATGCTACCATAA 1845 0.4157 MEDLEEEEKVQEEVLGSSLTMEKVAAAKKFIENHYRNQMKNIQQRKERRWILERKLASSDVPNEERINLIKDLERKETEYMRLKRHKICVDDFEPLIIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLKRGQVKSVIDCIQLKSETIMDVEHVRAERNLLAEVASHCIVKLYYSFQDADYLYLIMEYLPGGDMMTLLMREDTLSESVAKFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDINGHMKLSDFGLCKPLDCNTLSTLHENQTMDDENLAEPMDIDGCFPDADNQKSWRSPREQLQHWQMNRRKLEFKSCKRESFEFWKLWAPMRLCCSASVQNSVTRKEDLSHIAPFPLCKAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAILYEMLVGYPPFYSDDPITTCRKIVHWRNHLKFPEDAQLTLEAKDLICRLLCDVEHRLGTHGAKEIKAHPWFKDVEWDKLYETEAAFKPQVNGELDTQNFMKFDEVDPPTAARTGSGPSRKMLLTPKDINFVGYTYKNFDAVKGLRQSFASMHSVFNMKYENSVGNPIILVVRTTDEPKRFRNPCEGYHLSIGDSMKDYSSKRAAEETGLQMLASSGDPMLP 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3420 614 SMART serkin_6 93 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3420 614 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Sto9g3420 614 Pfam Protein kinase C terminal domain 483 528 IPR017892 GO:0004674|GO:0005524|GO:0006468
Sto9g3420 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Sto9g3420 614 SUPERFAMILY Protein kinase-like (PK-like) 76 510 IPR011009 -
Sto9g3420 614 ProSiteProfiles AGC-kinase C-terminal domain profile. 465 538 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sto9g3420 614 SMART pkinase_C_6 465 530 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sto9g3420 614 ProSiteProfiles Protein kinase domain profile. 93 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3420 614 Gene3D Transferase(Phosphotransferase) domain 1 196 481 - -
Sto9g3420 614 PANTHER SERINE/THREONINE-PROTEIN KINASE 352 567 - -
Sto9g3420 614 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 311 - -
Sto9g3420 614 Pfam Protein kinase domain 363 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3420 614 Pfam Protein kinase domain 98 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3420 614 Gene3D Phosphorylase Kinase; domain 1 84 195 - -
Sto9g3420 614 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 352 567 - -
Sto9g3420 614 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 13 311 - -
Sto9g3420 614 CDD STKc_NDR_like 91 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3420 Sto-Chr9 33797142 33804927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3420 1 547 AGC Kinase Gene Family AT4G33080 71.949 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Sto9g3420 Pkinase 2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3420 K08790 - gmx:100805455 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3420 9 33797142 33804927 Sto9g3420 9 33797142 33804927 ECH
Sto5g1005 5 6763924 6771407 Sto9g3420 9 33797142 33804927 ECH