Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3418 ATGGATTTCAGAATTGCTGGTGTCGAGTCCCCATTGTTGAACGCTCTGCACCAAATGATGGAGGCAACGGACGACGCTGGCGACAAGTCCATCAACGCGCCGAGCCGGACCTATGTTCGTGATGCGAAGGCTATGGCTGCCACTCCGGTAGACATAATGGAGTACCCAAACTCTTACGTGTTCATCATAGACATGCCTGGCCTGAAATCCGGGGACATCAAGGTTCAGGTGGAGGATGAGAATGTGTTACAGATAAGTggggagaggaagagagaggaagagaaagaagggGCCAAGTATGTGAGAATGGAGAGAAGGGTTGGCAAGTTTATGCGCAAGTTCGTGCTCCCTGACAACGCCAACACCGACGCCATTTCCGCTGTTTGCCAAGACGGTGTGCTCACTGTCAGTGTTCAGAAATTGCCTCCGCCTGAGCCTAAGAAGCCCAAGACTATAGAGACAGCACCTTTCCTGGCAAACAGAGCAATGAAGAAACCTTCACCATCCTCAGCAGGATCTGTGCGAAGCAGATGTTCAGCTGCAACAACATGTACTATAAACAATTCTCTCAACCGCAGGAACTGCCAAAGCAAAATGCTTTCAGAAGACTCCAATAACCCAAGTAAGTATCCCCCTAAGCTAAGGTATTGTGGGATGAGGTTTCGAGGAAAGAAGGgagACATTAGTAGTAATATTGGAGGGGATCAGATGAAGGAAGTTAGAGAGAGATATGCATTCAGAACCAAGTCGGAGGTTGAAATACTGGATGATGGCTACAAGTGGAGGAAGTACGGGAAGAAGATGGTCAAGAACAGCCCTAATCCAAGGAATTACTACAGGTGTATAGAGGAAGGATGCTCAGTGAAAAAGAGAGTAGAGAGAGATAGGGATGATCCCAAATATGTAATTACAACCTATGAAGTGATGTTATCCTTGCTTCCTTTCTGCATAGCACGGTTCGATAGGTACTCTGCGGCTGCTTGTGCAGCAGGGTCAGCTTCCTGTCCCCTTTCTGAGGCTAAGGCAACGCCATTTTTCTTGTGCCACAGAAGTATTCGTCTTCGAGCTAAGTCACATGCCTCTTCATTTGTCATCACATCCCACAGACCGTCACTGGCCAGAATGAGGCATTCATCGTCTTTTGTACGAGGAAGAAACATTACTTCTGGCTCTGGAATAATCCATGGCTTCAAATATCTATCACCTGAAAATCACAGAAAGTGGAATTGGAAATTGGAAACACTATCAGCGCAGTAA 1257 0.4551 MDFRIAGVESPLLNALHQMMEATDDAGDKSINAPSRTYVRDAKAMAATPVDIMEYPNSYVFIIDMPGLKSGDIKVQVEDENVLQISGERKREEEKEGAKYVRMERRVGKFMRKFVLPDNANTDAISAVCQDGVLTVSVQKLPPPEPKKPKTIETAPFLANRAMKKPSPSSAGSVRSRCSAATTCTINNSLNRRNCQSKMLSEDSNNPSKYPPKLRYCGMRFRGKKGDISSNIGGDQMKEVRERYAFRTKSEVEILDDGYKWRKYGKKMVKNSPNPRNYYRCIEEGCSVKKRVERDRDDPKYVITTYEVMLSLLPFCIARFDRYSAAACAAGSASCPLSEAKATPFFLCHRSIRLRAKSHASSFVITSHRPSLARMRHSSSFVRGRNITSGSGIIHGFKYLSPENHRKWNWKLETLSAQ 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3418 418 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 8 153 - -
Sto9g3418 418 Gene3D - 8 154 IPR008978 -
Sto9g3418 418 SMART WRKY_cls 255 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g3418 418 Gene3D WRKY domain 242 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g3418 418 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 41 155 IPR002068 -
Sto9g3418 418 SUPERFAMILY WRKY DNA-binding domain 247 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g3418 418 Pfam Hsp20/alpha crystallin family 51 153 IPR002068 -
Sto9g3418 418 SUPERFAMILY HSP20-like chaperones 32 149 IPR008978 -
Sto9g3418 418 Pfam WRKY DNA -binding domain 256 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g3418 418 ProSiteProfiles WRKY domain profile. 250 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g3418 418 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 8 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3418 Sto-Chr9 33781611 33791618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3418 243 307 WRKY Transcription Factor Family AT5G26170 80.000 1.76e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto9g3418 HSP20 7.5e-29 CL0190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3418 K13993 - twl:120004993 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3418 9 33781611 33791618 Sto9g3418 9 33781611 33791618 ECH