Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3417 ATGGAGGGAGGCGCTCCCTATAATCCTCGTACGGTAGAAGAAGTTTTCAGGGATTTCAAGGGTCGCAGGGCTGGCATGATTAAGGCCCTCACCACCGATGTTGAAGAGTTTTATCAGCAGTGTGATCCGGAGAAGGAAAACCTTTGCCTATATGGATTTCCTAATGAGCAGTGGGAAGTCAATCTGCCTGCTGAGGAAGTACCTCCAGAGCTTCCAGAACCTGCATTGGGTATAAACTTTGCCAGAGATGGGATGCAAGAAAAGGACTGGCTATCCTTGGTTGCTGTCCACAGTGATGCATGGTTACTTGCTGTGGCTTTCTATTTTGGTTCTAGGTTTGGATTTGATAAGGTTGATAGGAAGAGACTGTTTAATATGATTAATGATCTTCCTACGATATTTGAGGTTGTCACAGGGATTGCCAAGAAACAAGGAAAGGAAAAATCGTCAATTTCTAATCATAGCAGTACCAAATCTAAATCAAACTCTAAGCGAGGATCTGAATCTCAGGTGAAGTACTCAAAAGCAATGCCATCAAAGGAGGAGGATGAAGATGGTTTGGAAGACGAAGATGAGGAGGAGCATGGGGACACACTGTGTGGGGCATGTGGGGAGAACTATGCAGCTGATGAGTTCTGGATTTGCTGTGACATCTGTGAGAAGTGGTTCCATGCCATGGCAGAAGTTAATCCTGCAGCAGCATTGGCTATGGCGGCGGCCGCGGTATCTGAAAACCCCAATTGA 744 0.4597 MEGGAPYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGSRFGFDKVDRKRLFNMINDLPTIFEVVTGIAKKQGKEKSSISNHSSTKSKSNSKRGSESQVKYSKAMPSKEEDEDGLEDEDEEEHGDTLCGACGENYAADEFWICCDICEKWFHAMAEVNPAAALAMAAAAVSENPN 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3417 247 Pfam Alfin 11 139 IPR021998 GO:0006355|GO:0042393
Sto9g3417 247 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1 4 233 - -
Sto9g3417 247 MobiDBLite consensus disorder prediction 145 195 - -
Sto9g3417 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 189 237 IPR013083 -
Sto9g3417 247 PANTHER CPG BINDING PROTEIN 4 233 IPR045104 GO:0006355|GO:0042393
Sto9g3417 247 SUPERFAMILY FYVE/PHD zinc finger 189 225 IPR011011 -
Sto9g3417 247 MobiDBLite consensus disorder prediction 150 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3417 Sto-Chr9 33774007 33778248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3417 1 234 Alfin-like Transcription Factor Family AT3G42790 70.464 2.46e-105 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3417 - - dzi:111285222 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3417 9 33774007 33778248 Sto9g3417 9 33774007 33778248 ECH