Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3411 ATGGACGGCGATAGTGATACTAAGCATCAAGCACCGAAAGGCAGCGAAGAAGTAAGCACGAGGGAGAAGAAAACAGGAAACGCAGGTGAAGTGGTAGTGGCGATTTCTGCGCCTGAATCCAATGACTTGAATAGTGGGTGTGGATATGGATATGGAGCTCCATTATCAAAATCACCACCTTTGAACTGCGCTTCCCCTGAAATAAGGTTCAGTCCCAGCCCAAATAAACCACCCAAACATCCTCCTCCCAACGAAAACCTTACCCGAAGAAACTCACTCGCAAGGTCACTCTATTCCAAACCCAAATCTAGATTCGGCGAACAACCTTATCCCGTTGATCATGCCACAACAATGTTTGAATTTgaagacaacaacaacaacaacgttTCCACATTGCAACAACACATGGCTGTTCATTCGCCGTTTAGGAGCTCCTTCAATAACAAATCTGGGACTGTTAATCGGACGGTGTCCATTACTTCCATCACTCCCAAGACGCCGTTGATGGCTTCTCCGGGGCTAGTGGGCGAGGATGAGGATGAGATTATTTATAAGAAGGTTGAATTGAGTAAAGGGAAGCGTAAGAGGGTGACTACCAAGGTTTTCATTGAAGGGATTTTGTTTGTGTGCATCATAGGGTGCCTTGTGGCTAGCTTAACTGCTCACAAACTGAAAAATACTATGATTTGGGGGTTAGAGTTTTGGAAGTGGTGTGTGCTTGTGATGGTCACCTTTTGTGGCATGTTGGTAACTAAGTGGTTCATGCACATTGTTGTTTTCTTGATTGAACTCAACTTTTTGCTGAGGAAAAAGGTTCTGTATTTTGTTCATGGACTGAAGAAGAGTGTTCAAGTGTTCCTTTGGCTGGGTTTGGTTCTTCTCACATGGGTTCTATTAATCAACCGTGGGGTCCAGCGATCCGAACTCGCCACAAAAATCTTGAATGGTGTGACGTGGACGCTCGTTTCTCTTCTCATTGGAGCATTCTTATGGTTCTTGAAGACACTGTCACTCAAGATATTGGCGTCAAATTTCCACGTCAAGTCTTTCTTTGATAGAATTCAAGAATCACTCTTTCATCAGTATGTGCTACAGACTCTGTCGGGGCCTCCGCTGATAGAGGAGGCCGAGAGGGTTGGGAGATCACCAAGTATTGGTCAATTCAGTTTTAGGAGTACTAAAGGGAAAGGAGGCGTGAAGAAAGAGGTCATTGATGTGGGAAAGCTTCAACAGATGAAGCAAGAGAAGGTTTCTGCTTGGACCATGAAGATTTTGGTTGATGCAGTGACCAATTCAAGGCTGTCCACTATCTCTAACGTGCTAGATGAAAGTTTTGACGATGGAGGGATTGAACAAACTGATAAAGAGATCACCAATGAGATGGAAGCAACTGCTGCTGCCTATCACATTTTCAGGAATGTTGCTGGCTCTGGTTGCTCGTACATTgatgaggatgatctccggAGGTTCATGATTAAGGAAGAAGTTAATTTGGTGTTTCCCCTGTTTGATGGAGCAGAGACTGGACACATTGACCGAAAGGCTTTAACAAACTGGGTGTTGAAGGTGTATCAGGAGCGAAAAGCGTTGGCACATGCCTTAAGTGACACCAAGACTGCTGTGAAACAATTAAATAAGCTTGTGACGGGGATTCTGGTGGTTGTGACCATAATAGTGTGGCTTCTTCTTATGGAAATTGCCACTACAAAAGTACTCGTGTTCCTCTCGTCACAGCTAGTACTTGTAGCTTTTATGTTTGGAAACACGTGCAAGAATATATTTGAAGCTATCATATTTGTGTTTGTGATGCATCCATTTGATGTTGGTGATCGATGTGTTGTTGATGGAGTTCagCTATTGGTTGAAGAAATGAATATACTGACAACGGTGTTCTTGAAGCTTGATAATGAAAAGGTGTACTATCCAAACTCAGTTCTGGCCACCAAACCCATTAGTAATTACTACAGAAGCCCAGATATGGGGGACACTGTGGAGTTTTCCATTGACTTCATGACACCAGTGGAGAGGATTGGATCCctcaaagaaaaaataatgagGTATTTGGAGAAAAATCCACAGCATTGGCATCCTAATCACATGGTAGTAGTGAAGGAGATTGAAAATGTGAATAAGATAAAGATGGCTCTCTATATTACCCACACGTTGAACTTTCAAGAGTGGGGAGCCAAAAACAAGCGAAGAACTGAACTGGTGATGGAACTAAAGAAAATATTTGAAGAACTCAACATAAAATACAATCTTCTTCCCCAAGCAGTTCATGTGAGCCATATTGGATCCGATACGAGTGCACTCAGGAGATGA 2322 0.4203 MDGDSDTKHQAPKGSEEVSTREKKTGNAGEVVVAISAPESNDLNSGCGYGYGAPLSKSPPLNCASPEIRFSPSPNKPPKHPPPNENLTRRNSLARSLYSKPKSRFGEQPYPVDHATTMFEFEDNNNNNVSTLQQHMAVHSPFRSSFNNKSGTVNRTVSITSITPKTPLMASPGLVGEDEDEIIYKKVELSKGKRKRVTTKVFIEGILFVCIIGCLVASLTAHKLKNTMIWGLEFWKWCVLVMVTFCGMLVTKWFMHIVVFLIELNFLLRKKVLYFVHGLKKSVQVFLWLGLVLLTWVLLINRGVQRSELATKILNGVTWTLVSLLIGAFLWFLKTLSLKILASNFHVKSFFDRIQESLFHQYVLQTLSGPPLIEEAERVGRSPSIGQFSFRSTKGKGGVKKEVIDVGKLQQMKQEKVSAWTMKILVDAVTNSRLSTISNVLDESFDDGGIEQTDKEITNEMEATAAAYHIFRNVAGSGCSYIDEDDLRRFMIKEEVNLVFPLFDGAETGHIDRKALTNWVLKVYQERKALAHALSDTKTAVKQLNKLVTGILVVVTIIVWLLLMEIATTKVLVFLSSQLVLVAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVVDGVQLLVEEMNILTTVFLKLDNEKVYYPNSVLATKPISNYYRSPDMGDTVEFSIDFMTPVERIGSLKEKIMRYLEKNPQHWHPNHMVVVKEIENVNKIKMALYITHTLNFQEWGAKNKRRTELVMELKKIFEELNIKYNLLPQAVHVSHIGSDTSALRR 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3411 773 MobiDBLite consensus disorder prediction 1 24 - -
Sto9g3411 773 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 22 762 IPR016688 -
Sto9g3411 773 MobiDBLite consensus disorder prediction 1 90 - -
Sto9g3411 773 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 22 762 - -
Sto9g3411 773 PIRSF Memb_At2g17000 1 771 IPR016688 -
Sto9g3411 773 Pfam Mechanosensitive ion channel 546 751 IPR006685 GO:0016020|GO:0055085
Sto9g3411 773 Gene3D - 605 654 IPR023408 -
Sto9g3411 773 SUPERFAMILY Sm-like ribonucleoproteins 595 654 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3411 Sto-Chr9 33750272 33752954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3411 16 762 Mechanosensitive Ion Channel Family AT5G12080 61.252 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3411 K22048 - gmx:100803107 1078.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3411 9 33750272 33752954 Sto9g3411 9 33750272 33752954 ECH
Sto5g0991 5 6686197 6688697 Sto9g3411 9 33750272 33752954 ECH