Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3400 ATGATGCACATGACCTTCTATTGGAGTTACAAAGTGACCCTCCTCATCGATTCCTGGAAGACCAATTCATGGACCAGTTACGTCCTCACTTTGCTTGCCTGCCTCCTCGCCTCCTCCTTCTACCAGTATCTTGAGAATCGTCGTATTCGCATCAAGCTCTTTTCTTCTCCCACGCCGCAGATCCAGATCCCTCTTCTCCAATCCAATATCGCCGGAGACAAAGCCAAGTTGGGATTGAAGTTCGCCGGAGCGATTCTGTTTGGGGTGAACTCGGCGATTGGGTATTTGCTCATGTTGGCCATCATGTCGTTTAACGGAGGGGTTTTTATTGCCGTCGTTCTGGGTCTTACCATCGGCTACTTCTTTTTCAGGAGCGAGGGTGAAGATGTTTCGCTTGTCGTTGACAATTCCTGTGCCTGTTCTTAG 426 0.493 MMHMTFYWSYKVTLLIDSWKTNSWTSYVLTLLACLLASSFYQYLENRRIRIKLFSSPTPQIQIPLLQSNIAGDKAKLGLKFAGAILFGVNSAIGYLLMLAIMSFNGGVFIAVVLGLTIGYFFFRSEGEDVSLVVDNSCACS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3400 141 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 141 IPR007274 GO:0005375|GO:0016021|GO:0035434
Sto9g3400 141 Pfam Ctr copper transporter family 4 123 IPR007274 GO:0005375|GO:0016021|GO:0035434
Sto9g3400 141 PANTHER CTR FAMILY COPPER TRANSPORTER 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3400 Sto-Chr9 33678267 33678692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3400 1 141 Inorganic Solute Cotransporters AT5G20650 54.110 9.72e-52 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3400 K14686 - gmx:100801036 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3400 9 33678267 33678692 Sto9g3400 9 33678267 33678692 ECH
Sto5g0966 5 6508842 6509279 Sto9g3400 9 33678267 33678692 ECH
Sto3g0629 3 4168393 4168863 Sto9g3400 9 33678267 33678692 ECH
Sto9g0075 9 706530 706967 Sto9g3400 9 33678267 33678692 ECH
Sto1g0513 1 4769368 4770656 Sto9g3400 9 33678267 33678692 ECH