Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3396 ATGGAGCCAGTGACTCCTGTTTCATCCTCTCTCGGTTCTGAACCTGTGGAAGTGCGATCGGCTTCTCCTTTTGCTGGTCTTGTTATATGCGTTACTGGTCTATCTAGagAAGCTAGGAAACAGGTCATGGAGGCTACACAGAGATTGGGGGGGCACTATAGCCCCAATTTGCATCCTCAATGTACCCATTTGGTGGTTCAGAGCTTTGGTGGACGGAAGTTTGAGCATGGACTCAAGCATGGAGCAAAAAATGGTCTCTTTGTTGTTACACTGGGTTGGTTTGTGGATAGTGTCAGGAAAAATGTGAGGTTGAGTGAATCGCTTTACAGTGTGAAGACTTATGCAGATAACAATATGCGCTTTGATGAAAATTCTTGTCTTCCTGCAAGAATTCGTGAAACCAAACAAGTTGATAGAGTTGAAGTATTTCAAAGACTTTCTATGAGAGAGTCCAGCAAAGATGGGGATTTGACTTTATCTGGTTGCTCTATCTATGTTGATCCAGACATCTCACCCGAATTGCAGAATAAGGTTGTTGAGACTGCTTCCAGAGAAGGTGCCAGTTTGGTGGAACAGTGGTTTGTTGGATGCAATGCTAGTCATGTAGTCACTGAAGGGACGTCCATCCAGAAATATCTTGGATACTCAAGTAACTTCATTACACCACTGTGGATTCTGAAAACAGCCAAGGAAAAACAAGTGCAAAGGCTTGTTCATATGTCTGCTGATTTGGCAAGGCAAGTTGGTTTGATGCTTGAGGATATTCATAGTGGCATGGCAGGGGAGGAATCACTAAAGGAAGATCTCCCTGAGGATTTTCAGGGTGGTAAAAATAAAGTAACTTACGAAGAAAGGCAACAGATTGTGAATTCTGCAAAAAATGGTGTCAGAAATCGCCGTGGTCGTCGAATGCAGCAGACTTGTCAGACTCCAATGCGTCCTATAACACCAAATAACCTTCTGGATTCGATCTGCTGGTCAATATCTGAACCAACTTCAACAGCTTCCATTTATACGGACTCTTTGAGTGTTGAAGATCCAAGTGAAAGTCATTCTTTAATGTTTTTTGATGCAAAAGGGGTTGTCAAGGACACACAAGCTTCCTTTTCAAATGCAACTCGACCTCTGACAGAAAGTGAGAAATCTGAATTGATATTTAAAAACCATTTTCTTACCATACTCTTTCCGATTGACCGATTTGCTGAGATGGGTCCTTCTTCAAGAACATATTTCAGCCACAATGGTTTTACATGTCTACAGGTGTTGGATTATGTCTTCGCATTTTATCAGGAGAATCTGTCAGCCCATGAAATAGAAGCTACAATTCATAGTGATTCAAGACATGCTGATCGGCTTCGATCAGTGTACTCCAGTAAGGAAACAGCCGAGCGAGGGTTTGTGATTTTCAAAAGGGTTGATTTCTTGGGTAGTCGTACAAGTTTTGAAATGTTGAAACGTGTAACTGGAGACAACAACTCTAATGTCTATGAATTATTACTCAGGGCCTAA 1509 0.4182 MEPVTPVSSSLGSEPVEVRSASPFAGLVICVTGLSREARKQVMEATQRLGGHYSPNLHPQCTHLVVQSFGGRKFEHGLKHGAKNGLFVVTLGWFVDSVRKNVRLSESLYSVKTYADNNMRFDENSCLPARIRETKQVDRVEVFQRLSMRESSKDGDLTLSGCSIYVDPDISPELQNKVVETASREGASLVEQWFVGCNASHVVTEGTSIQKYLGYSSNFITPLWILKTAKEKQVQRLVHMSADLARQVGLMLEDIHSGMAGEESLKEDLPEDFQGGKNKVTYEERQQIVNSAKNGVRNRRGRRMQQTCQTPMRPITPNNLLDSICWSISEPTSTASIYTDSLSVEDPSESHSLMFFDAKGVVKDTQASFSNATRPLTESEKSELIFKNHFLTILFPIDRFAEMGPSSRTYFSHNGFTCLQVLDYVFAFYQENLSAHEIEATIHSDSRHADRLRSVYSSKETAERGFVIFKRVDFLGSRTSFEMLKRVTGDNNSNVYELLLRA 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3396 502 MobiDBLite consensus disorder prediction 294 313 - -
Sto9g3396 502 CDD BRCT_TopBP1_rpt2_like 23 101 - -
Sto9g3396 502 Gene3D BRCT domain 22 113 IPR036420 -
Sto9g3396 502 Pfam twin BRCT domain 27 93 IPR001357 -
Sto9g3396 502 SUPERFAMILY BRCT domain 22 112 IPR036420 -
Sto9g3396 502 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 8 502 - -
Sto9g3396 502 SMART BRCT_7 156 232 IPR001357 -
Sto9g3396 502 SMART BRCT_7 21 101 IPR001357 -
Sto9g3396 502 ProSiteProfiles BRCT domain profile. 19 111 IPR001357 -
Sto9g3396 502 Pfam Family of unknown function (DUF6699) 324 486 IPR046522 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3396 15 111 Core DNA Replication Machinery Family AT1G77320 37.113 2.98e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3396 - - gmx:100815253 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3396 9 33659796 33664504 Sto9g3396 9 33659796 33664504 ECH