Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3360 ATGAGGGGTGTGGATACTTGTCTTAAGCTGAATCTCACATCTTCTCCTCAACCTCAACTCAATTTAGTGGAGGGTGAGGATGATGAGGGTTTGGTGGAGAAGTTGCATCGTCTGAGTAGTGAGAATAAGAGGCTGACGGAGACGCTGAGCCACATGTGTGAGAGCTACAATGTTTTGCAAAATCAATTGAAGCAGTTTATGATAAGTAGTAGTAATTATCCTGATGAAATGGATCATCTAATTACTCCTCAATCTCAATCAAGGAAGAGAAAGGCTACTGATCATGATGATCACAAgacttataataataatatgtatggtGTTAACACTAGCACCATTAGTACTAGTGATCATCAGGAAGAGTCATACAAAAAGGCCACCAAGGTCTCAACAGTTCTAGTGCGCACCCAACCATCTGATACTAGCTTGtATGTGAGGGATGGATATCAGTGGAGGAAATACGGTCAGAAGGTAACCAGAGACAACCCTTCTCCTAGAGCTTACTTCAAGTGTTCCTATGCCCCAACCTGCCCAGTCAAAAAGAAGGTGCAAAGAAGTATAGAAGACCCAAGAGTGTTGGTGGCAACTTACGAAGGAGAGCACAATCACGGATGCCAAGTACGATTGGGGTCAGTTGGGCATTGTGAAGAGGCGCAGGTGGGTTCATCCAGATTGCCTAACCAACTTCAAAACTCAATATTCAAccaatttttggttcaacaaCTGGCTACTTCTTTCACCACAGATCCCAATTTCACAGCAGCACTTGCTTCCGCCATTTCCGGATCAACAATTTTACGCCCTACTTAA 810 0.4185 MRGVDTCLKLNLTSSPQPQLNLVEGEDDEGLVEKLHRLSSENKRLTETLSHMCESYNVLQNQLKQFMISSSNYPDEMDHLITPQSQSRKRKATDHDDHKTYNNNMYGVNTSTISTSDHQEESYKKATKVSTVLVRTQPSDTSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSYAPTCPVKKKVQRSIEDPRVLVATYEGEHNHGCQVRLGSVGHCEEAQVGSSRLPNQLQNSIFNQFLVQQLATSFTTDPNFTAALASAISGSTILRPT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3360 269 Pfam WRKY DNA -binding domain 147 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g3360 269 PANTHER WRKY TRANSCRIPTION FACTOR 40-RELATED 23 263 - -
Sto9g3360 269 SUPERFAMILY WRKY DNA-binding domain 142 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g3360 269 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 23 263 IPR044810 GO:0003700
Sto9g3360 269 MobiDBLite consensus disorder prediction 82 109 - -
Sto9g3360 269 Gene3D WRKY domain 127 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g3360 269 ProSiteProfiles WRKY domain profile. 147 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g3360 269 SMART WRKY_cls 145 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g3360 269 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3360 Sto-Chr9 33450721 33451719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3360 4 262 WRKY Transcription Factor Family AT1G80840 42.568 8.66e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto9g3360 WRKY 1.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3360 - - gmx:100127373 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0914 5 6171404 6172512 Sto9g3360 9 33450721 33451719 CCT