Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3353 ATGGCGAAGTGTCACCGGAGCAACGTTGGATCCTTGGTTCTCGACCACCGCCATCCTGCCATGAATGAAACTGTCGGCGGCCACGTCCGCCTATGGAATGCGCTCTCCGCTTCCTCATTTCGCCGCATCATTTTCGACGCTGTCAGCTGCGGCGGCAGCTCTCGGTATGACCCTCGACACCATCACGATTTTACTTCCTCCACCTCAACGACGACCTCAGCCTCCGGGAGCTCCAAGGAGAGGCAACAAGAGCAGAGACAAGCGAGGTCCGAGAAGCTATCGGATCTTCTGCATATAGCGGACTCTGAAATTCAGGCCGAaaccaagaagaaggaagaggcgTTGGAGGAGCTGAAGCAAATAGCGATGGAATTGCAGGGAGAGGATTTGATGAAGCGGCAAATGGCTGCGGCAAATGTCAGATTGCTCGCGAAGGAAAACTTGGAAATCAGAGGGACACTCGCTATGCTTGGAGTCATTCCTCCTCTGGTTGGAATGCTTGACTTGGAAGACGCCAATTCTCAAATCGCTTCGCTCTATGCGTTGCTCAACCTCGGGATCGGTAACGATGCAAATAAAGCAGCCATTGTCAAAGTTGGCGCAGTTCACAAGATGCTACAGCTCATTGAATCTCCTAATGCTCCTGATTCATCAGTCTCTGAAGCAATTGTCGCAAATTTCCTTGGGTTGAGTGCTTTGGATTCGAACAAACCAATTATTGGATCGTCTGGTGCAATACCGTTCCTGGTTAGAACCCTTAAAAATCTAGATAATAAATGTAGCCCCCAAGCAAAGCAAGATGCTCTTCGAGCACTGTACAATCTTTCAATCTTCCCAACCAATGTTCCATTCATTTTGGAAACCGATTTGGTTCCATTTCTTATAAATGCAATAGGAGACATGGAGCTAAGTGAAAGAATCCTTCCAATCCTGAGCAATCTGGTATCAACTCCAGAGGGCCGAAAAGCTATCAGTGGTGTGCCGGATGTATTCTCAATTCTGGTTGATGTATTGAATTGGGCAGATTCACCAGCATGCCAAGAAAAGGCTTCATACATTTTGATGATTATGGCACACAAATCCTATGGTGACCGGCAGGCCATGATCGAAGCAGGGATTGTATCATCATTGCTTGAGTTGACGCTTCTGGGTACCACTTTAGCACAAAAAAGGGCCTCTAGGATGTTGCAATGTTTGAGAGTAGACAAAGGGAAGCAGGTTTCTGGGAGTTCAGGTGCAAATGTCTCTGCTCCTATCTATGGCTCTTCTTCATCTAGTACAAAGCCAGATGGAGGTGGAAAAAATGGTTTGGAGGAGGAGGAACATATGATGAGTGAGGAAAAGAAAGCAGTGAAGCAGTTGGTCCAGCAGAGTTTGCAAAACAACATGAAGAAAATTGTGAAGAGGGCTAATATCCCTCAGGATTTTGTTCCGTCCGACCATTTTAAGTCACTCACTTCAAGTTCGACTTCAAAGAGCTTGCCGTTTTGA 1491 0.4628 MAKCHRSNVGSLVLDHRHPAMNETVGGHVRLWNALSASSFRRIIFDAVSCGGSSRYDPRHHHDFTSSTSTTTSASGSSKERQQEQRQARSEKLSDLLHIADSEIQAETKKKEEALEELKQIAMELQGEDLMKRQMAAANVRLLAKENLEIRGTLAMLGVIPPLVGMLDLEDANSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLQLIESPNAPDSSVSEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLKNLDNKCSPQAKQDALRALYNLSIFPTNVPFILETDLVPFLINAIGDMELSERILPILSNLVSTPEGRKAISGVPDVFSILVDVLNWADSPACQEKASYILMIMAHKSYGDRQAMIEAGIVSSLLELTLLGTTLAQKRASRMLQCLRVDKGKQVSGSSGANVSAPIYGSSSSSTKPDGGGKNGLEEEEHMMSEEKKAVKQLVQQSLQNNMKKIVKRANIPQDFVPSDHFKSLTSSSTSKSLPF 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3353 496 MobiDBLite consensus disorder prediction 407 431 - -
Sto9g3353 496 Gene3D - 259 412 IPR011989 -
Sto9g3353 496 MobiDBLite consensus disorder prediction 433 449 - -
Sto9g3353 496 MobiDBLite consensus disorder prediction 476 496 - -
Sto9g3353 496 Gene3D - 78 258 IPR011989 -
Sto9g3353 496 MobiDBLite consensus disorder prediction 56 92 - -
Sto9g3353 496 Coils Coil 97 128 - -
Sto9g3353 496 SMART arm_5 189 232 IPR000225 GO:0005515
Sto9g3353 496 SMART arm_5 147 187 IPR000225 GO:0005515
Sto9g3353 496 SMART arm_5 278 316 IPR000225 GO:0005515
Sto9g3353 496 SMART arm_5 233 277 IPR000225 GO:0005515
Sto9g3353 496 Coils Coil 437 457 - -
Sto9g3353 496 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 496 - -
Sto9g3353 496 MobiDBLite consensus disorder prediction 480 496 - -
Sto9g3353 496 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 496 - -
Sto9g3353 496 MobiDBLite consensus disorder prediction 65 81 - -
Sto9g3353 496 MobiDBLite consensus disorder prediction 406 451 - -
Sto9g3353 496 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 244 276 IPR000225 GO:0005515
Sto9g3353 496 SUPERFAMILY ARM repeat 117 399 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3353 Sto-Chr9 33388407 33390347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3353 107 400 U-box Gene Family AT2G23140 33.110 6.71e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3353 - - mesc:110603056 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0904 5 6085157 6087207 Sto9g3353 9 33388407 33390347 CCT