Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3349 ATGGAAGACAAGTATATGAAACCTCCATATTCTTTTGAGCCATGTGGTACCCAATACCTGACTGCAAATCCTGCCTCAGTGCAGGCTGCTTCATCAAATTCCAACATGGCAAGTGATGGACTCATGTTTTCGAGTTTGACCCCTTTTATATGTCCCAATGACACCCCTTTGTCCTCAGTTTCACAGCATGATTGGCACTACCAAAATTTCCCTTTCACTTCTTCTCGGACATTTCAAAGAGATGATATCATGCACATGCTAGGAAATTCGCTTATTCAGAGCGACGACAATATGTATTTATCACCTAAACTTTCTTCCCATCCAGAAATACATTCTACAACATTAATTTCTCATCCTCCTCAGGAAAGACCGGATCCCTTTCAGGATATTCTCAATTTTCCTGAAAATTATTCTGTCATGAATGGCCAGGTGGAAAATAGCACTTGTTACATATCTGATGACAGTATAATTAACAAAACTGATTTTAGGGAGTGGGTTCATCAGTTAATGTCAGTTGATAATTCTCCGCATCCAATTTGGAGTCAGTTTCTTGGTGATGATAATGTAGCATATTCAGAATCAAAGGAGACCCAGGCTAACAAGCAGCAGCATGCACCATCTGGACAAGTTAATACTCTTCCTACTTCAGTGTCCAATGGAGTACAGCATAAGCCAAGAATTCGTTGGATTCAAGAGCTTCATGAACCTTTCGTGGAAGCAGTGAATAAGCTTGGTGGTAAAGAGAAGGCTACTCCAAAGGGTATCTTGAACCTAATGAAAGTTCCGGGCCTTACTATCTGTCATGTGAAGAGCCATCTACAAAAGTATAGAACAACCAGAGAAAAACCTGAGTCATCAGCAGGAACCTCAGAGACAAAGTCGACATCAACCACGAAAGCGACTATGGACTTACATGAGACATTGCGGAAGCTGATGGAACACCAGAAAGGGCTTTATGAAAAACTTGAGATAAATGACAGGAACATAGCGATTAAGATTGAAAAACAATCCAAGTTGGTTGAGATGATGtttgagaaagagagagagagatggatgACAGGGAAGTCACGACTCTGA 1077 0.3983 MEDKYMKPPYSFEPCGTQYLTANPASVQAASSNSNMASDGLMFSSLTPFICPNDTPLSSVSQHDWHYQNFPFTSSRTFQRDDIMHMLGNSLIQSDDNMYLSPKLSSHPEIHSTTLISHPPQERPDPFQDILNFPENYSVMNGQVENSTCYISDDSIINKTDFREWVHQLMSVDNSPHPIWSQFLGDDNVAYSESKETQANKQQHAPSGQVNTLPTSVSNGVQHKPRIRWIQELHEPFVEAVNKLGGKEKATPKGILNLMKVPGLTICHVKSHLQKYRTTREKPESSAGTSETKSTSTTKATMDLHETLRKLMEHQKGLYEKLEINDRNIAIKIEKQSKLVEMMFEKERERWMTGKSRL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3349 358 MobiDBLite consensus disorder prediction 193 219 - -
Sto9g3349 358 Gene3D - 223 281 - -
Sto9g3349 358 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 228 281 IPR017930 -
Sto9g3349 358 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 75 - -
Sto9g3349 358 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 108 349 - -
Sto9g3349 358 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 224 279 IPR006447 GO:0003677
Sto9g3349 358 SUPERFAMILY Homeodomain-like 222 281 IPR009057 -
Sto9g3349 358 MobiDBLite consensus disorder prediction 275 299 - -
Sto9g3349 358 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 75 IPR044848 GO:0003700
Sto9g3349 358 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 108 349 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3349 Sto-Chr9 33365291 33367441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3349 23 349 G2-like Transcription Factor Family AT3G04450 35.593 8.10e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto9g3349 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3349 - - gmx:100803267 298.516