Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3338 ATGAAAATGAAGCTTCTTCTTATGCTGCTTCCTTTTCTTCAACAACCCATTTGGGTTTCTGCTTCACCTGACTCTCCTCTTTCCTCACCTCAATTCCCATCCATCTCTCCAACATCAATAATGCCTGCTTTCTCCCCCACCCCAGGTATGCAGGCGGGGAATGAACAGAACCCAACAGATTCACACAAGAAAATGGTAATAGTCGTCCTCGTAGCAAGCACTGCTCTTGGTGTTGTCATTTTGTCCTTGTCATGTCTCTGGTTTCATTACAGCAAGTATCCCTCCAAACCCAACACAAATAATGCCCAAAGCTCAGATGCTGAGAAAGCGCTTGCATTGGCTCCATGTTTGAGTAAATTCAGTTCTCTCAAGGTGATTGGTAAGAAGGGATCTGTTGTAATAATAGATTATAAGAAAATAGAGAAAGCGACCAACAATTTTCTAGAATGTAACATCTTGGGTGAGGGTGGATTCGGGTGTGTTTACAAGGCTCAATTGGACGATGACATGGAAGTTGCCGTCAAGAAATTGCACTGTCAAAATGAGAACGCTGAGAGAGAATTCGAGAATGAGGTGGATTTGTTAAGTAAAATTCAACATCCAAATATCATTTCTTTGCTGGGTTGTAGCATTAATGGCGACACCAGGTTTATTGTCTATGAACTGATGCAAAATGGATCCTTAGAAACTCAATTACATGGACCTTCTCATGGCTCGGCTTTGACTTGGCACATGAGGATGAAGATTTCTCTTGATATAGCAAGAGGATTGGAATATCTGCATGAAAATTGTAACCCTCCAGTAATCCATAGAGATCTGAAATCATCTAATATTCTTTTAGATGCAAATTTCAATGCCAAGCTTTGTGATTTTGGTCTTGCCATAACTGATGGGTCCCAAGAGAAGAATAACATAAAACTCTCAGGCACATTGGGATATGTGGCCCCAGAATATTTATTAGATGGTAACTTAACTGATAAAAGCGATGTATACGGCTTCGGAGTAGTGCTTCTGGAGCTTCTATTAGGCAGGAAGGCTGTGGAAAAAGTATCATCAGCACAGTGCCAATCTATTGTGACATGGGCGATGCCACAGCTCACCGACAGATCCAAGCTTCCAAACATTGTGGATCCCGTGATTAAGAATTCAATGGATCAAAAACATTTGTACCAGGTTGCTGCAGTGGCAGTGCTATGCGTGCAAGCAGAACCAAGTTATCGTCCACTGATTACAGATGTTCTGCACTCACTCATCCCTCTTGTTCCTGTTGACCTTGGGGGCACACTCAGAGTTGCAGAGCATGGAATCGTTAATGATGACGCCACATGTCAACAAACTTAA 1341 0.4221 MKMKLLLMLLPFLQQPIWVSASPDSPLSSPQFPSISPTSIMPAFSPTPGMQAGNEQNPTDSHKKMVIVVLVASTALGVVILSLSCLWFHYSKYPSKPNTNNAQSSDAEKALALAPCLSKFSSLKVIGKKGSVVIIDYKKIEKATNNFLECNILGEGGFGCVYKAQLDDDMEVAVKKLHCQNENAEREFENEVDLLSKIQHPNIISLLGCSINGDTRFIVYELMQNGSLETQLHGPSHGSALTWHMRMKISLDIARGLEYLHENCNPPVIHRDLKSSNILLDANFNAKLCDFGLAITDGSQEKNNIKLSGTLGYVAPEYLLDGNLTDKSDVYGFGVVLLELLLGRKAVEKVSSAQCQSIVTWAMPQLTDRSKLPNIVDPVIKNSMDQKHLYQVAAVAVLCVQAEPSYRPLITDVLHSLIPLVPVDLGGTLRVAEHGIVNDDATCQQT 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3338 446 PANTHER BNAA04G14780D PROTEIN 51 438 - -
Sto9g3338 446 SUPERFAMILY Protein kinase-like (PK-like) 128 417 IPR011009 -
Sto9g3338 446 Coils Coil 167 194 - -
Sto9g3338 446 CDD STKc_IRAK 153 420 - -
Sto9g3338 446 ProSitePatterns Protein kinases ATP-binding region signature. 153 176 IPR017441 GO:0005524
Sto9g3338 446 ProSiteProfiles Protein kinase domain profile. 147 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3338 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Sto9g3338 446 SMART serkin_6 147 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3338 446 PANTHER OS01G0750732 PROTEIN 51 438 - -
Sto9g3338 446 Gene3D Transferase(Phosphotransferase) domain 1 223 422 - -
Sto9g3338 446 Pfam Protein tyrosine and serine/threonine kinase 151 387 IPR001245 GO:0004672|GO:0006468
Sto9g3338 446 Gene3D Phosphorylase Kinase; domain 1 110 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3338 Sto-Chr9 33293182 33296006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3338 28 363 Receptor kinase-like Gene Family AT1G80640 48.665 8.42e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Sto9g3338 PK_Tyr_Ser-Thr 5.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3338 - - gmx:100812044 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0895 5 5997990 6000451 Sto9g3338 9 33293182 33296006 CCT