Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3335 ATGGACCGCTCGTGGAACATCAAATGTGATTCGACATTTCAGCAATTAACACATGCGACAGTTTCCTCGCTACCGCAGGAGCTTAGGACTCAGATGGAGGTAAATTCAAGTCATTGCCTTTATCCACAAGTTGCTCATGGACTAAGATCCAAGTTTGATGGAGGGATGCAAGATCCTGATTACCTGAGATTTCCTTACACAATCAACCATGCATCAGGCCACGCTGATGCTGAGAATTCGTTTCTGGCTCTCCTGTCTGGTCCTCCGTCATTGTTACAATGTGAATTACAGGAGTTGTCAGATCCAAAGTCTGGCACCTCCTCTGGTAATTATTCTACTGCTAGTAGGAATTTTGTTGTGGATTCTGTAGGAACTGGGACCATTCTAACATCGAGTAAGGGGCTAATGACTGAAAAGTTAACCAATCACAAAATGCAAACCAAGGTGGATTCTTTTCCAGCTATAACTTCTAGGGAAATGGTGGGGTTGAGTAGTGGTATCAATAATGTATTTCCTGATATTCAGAGAGCTGATGCATATATCCAGCCTGCACTTCCTGTTAGTGAGAATGCAAGGGAGCCTCATTGTTCTACAAGGCAACGATGTGGTGCAATCCCTTTATCTAATCTAAATATCTGCAGCTCGTATATTCAAGATATGCCAAATATGGCATTAGAAGAAAGTTTTTCTAAGATGGCAACTCCTTTCATGAGTGGCTGCCCTCGTGTGTTCTGCATGGGAAAAAGTGGCTATCTTCTTCTCAGCAATACAGGTCTTCTTGGTATTGTTTGCTCATGCCATTGTTGCCACATGTCTGTCCTTAAATTTTGCGAGCATTCAGGGTTACATGATGTCAACCCAGGGGATGCTGTTCGTATGGAAAGTGGTGAGACCATTGCGGAATGGCAGAAACTCTACTTCTTGAAGCTTGGGATTAGGTCTcctggaaatgagaatgaatgGGACTGGCCTGAAGTATTATCAATATCAACAACAGTCAGCTTGATGAAATCCAATGCAACTAACTTAAATATGTCCAAGAGTGATTCGTTTCATCCTTTCAATCCATCTGTTGTCTCATTAAGAAAGCCTCCCGACAATGTTATGTTTCCAAAGGATGCTCATACCGACTACGATGGTGCACTAACCAGCAAACAACAGACAATTATCCACAATGGTTGCAACATTCCTATCAGAGGTTCTACTGGTATTTCACCAAGAAACTTGCATGACAGGGCAGATAGCCAGTTTATGGAATTCAATGCAACTCCCCCAAATTTGGTGGGAACTCAATGGGATGATGGTTCTCTGCTTACACCTGCATACCTTGATACTCTGAAAAGGAGTGGGAATTTTTCTGTTGCCAACTTTCCTTCACAAAATCCAACTAGCTTTCTTAAAGACCTTGGTTTTTGTGTAAAAAAGAGTGCAAATGAGGGTTCTGTTGGCAGAGATGCTACTTCCTCAAATTTTGAGCTGAGGCTTGGTCAACCACCTCAGACAAGAAATCCAGTTCTGTCCATTATAGAACAACAGCAGTTTGACTCGCTTGTCAGTCCGCCAAAGTTGCAATATTCAATGCAGATAACTCAGAATAGTGCCGAATCACTTGGCAGAGAGGATGAATTGAAGAATAACTTTTGCTATGCTGCTGGTCCTTCTAATTCCAAAATGATTGAAGAACAATCCAAGCTAAAACTGAGGAACTTTATGTCAGGTGTTAATAATGGCTTAAGTGCTGCTAGAGCTGGATTAGAAACCGACAATGTGGCCAAGGGGTTTGTATCTTCATATTCACTTTTTAACTCTCAATCTCAGGGCCAGGGGAAAACAAAAGCTAATGAAAATTTGGAAAATGATGGCAGTGTTATCATGTCCAAGATATTGCATTCTGGATCTAATAACTTACAGTCTAATGTCCTGTGGAAGAGTGATGATCACAGAGAAAGGCAGTTGAACAATTCTTCACTGGTTAACAACAAAGTTTTGGACAATGATAAAGgtgcagcctgtgctaaagaATTTTATGCCAACGTTGATCCAGGATCTAGAATGGGTAAGTTAGTGGGTCTTCCAAGCTTTGTGAGAGCTGTAGGTGGAAGTAGTAGTTGTTGTATCTCATCACTAAATGGAAAGATCTCATGTCATGAACCAAGCATGTTGGTGGATGCATCTACTGGTACAAACTTTTCTTATGGTTCTAACAAGGCTTCTTCTGTTGGACAAGGCAGTCATCTCACTGTAAAATCCTTGGGTACTCAATTGGCTTCCCGGATGCCAGCTGAAGGAATGTTGATTGGCTTTCCCTTTCTTGTTTCAAGCTCTACATCAAACCAGGCCCCTACTTTTCTGGAACAAGAGGGTATTAATGTGGACACTTGTTTGCTTGATGAAAATATGAGATTGCTTGCATTGACACAGATACTGGAGTTATCAAGGCAACAACATACATTGTATTTGCGTGAAATGAATCAAACACAAGGGAGGTCGTGCAGTTTTCCAAATGGTCAACACTGTATACATGAGGCTTCAACTTCGAAACAGGGTAATTCTGATGTTACATTGAAATCTCCGCCAAAGAAAGGGACTTGTGTGAATCATGGGATTACTGATGATTTAGAGAAATTGGCTTCTTTTACAGGCAAGCAGCCTCAAATTTCCTTTCCCTCCCCTACTTGCAACAGTTTGAACAGATATTGCTGTCTTTCAACCTTGGAACCAAGACCATTACATTCTAAGGAAAAGGAATTGCAATGTAAACATTCCTCTGATCTACGAAAGGAGGGACCCTCTCTGAGCCTCGGAACAAGTAAAGGCATCACTAGATCCTGTGAATGTGAACTGTCCTGTGAATGGTCTGAGCAACCAACAGATACACATTTGGTCGACAAATATACTTGTTCTGCTCAAGTGAACTGTCCTGGAAATTTTATGCTGGGAGTTGGACCCTCTCCTTATAACATCAGACAACAACCGGCAAAATCTAATTTTACCATTGATCAGAATGCTTCTCAAGATAAAAACAATCAATTTGTGCAAGTTGCAGGGTTCGATGATCAAGATCTTAACAAACTTAGTTCAAACATTATCGAATGGAGAGCTGTGCCAAGTAAGGTTAGGAAAGGAGTTTGTGATGTGGGATCATTAGATCAGCCAGCTATTGTTTTAGACTGTTGGCAAGGTGGGGAACAACTTGGAAATATACCTGCTAAACGCTTAAAAAGAACAGCCTATTTGGAAGACTCTTTGAAAGAGCAAGAAAGTTCTAGCGTTTCTTCTGGATGTTCTGCCCCTGTGGTTACTCAATTGTCTGTCGAGGTCAACAATGTTTATTCTTCTACTGTTGATGCTGTAGACAATCATTCTTTTGACAATCTTGTAGTTGATGAGGGGTCAAGCATTGATAAAGGCTGCTCATCTGATACCCTCGAAAGTGATAGGAGTGCTGAGATCCTTGGCTCAACTTGTGATACTTACTTGAAGAAGGCCTATGAAAGAGTCTCAAATGATCAACCATGTCGTAGTCTTCTTGATGAACTTAAACTATTAAATTCATTGACATGGAAGAAAGGCCGTGGTCAAAACTATGCCGAGCATTCTGAAAATTGCAAAACCAAACAATCTCTAAAAGTCAGAAGGGGTTTTAAAGGTATAAagcaaaagagaaaggaaataaGTATGCTAGATGCTATGTTCCCTTCTGAAATTCCTTCCTCATTGCATAATAAGAATGCTGAAAGTTCTGAAGCTGTTGATTTCCCTTCCAATCTGTCTAAAGAGATCCAAATGTATTTTGCATCCGACCAGCAAAGATCGAAAAACAGAGCTTCTTTTGTTCAACCCAGTGCCACAGGGAAAGCTGCTTTTTCATCTAAATTTCTCTCTTGTAAGAGTCATCTAAGAAAGCATTATAGTGACAGAGATGGACAAAATAGTTACAAGACAAGATCAGATTTTGAAGCTGAGTTTCACAAATTCACTAAAGTATCTGGAACAAGGAAATTAAGAAAGGATTTTACTTCTGAATCATTTAGGCACTTTCAAAAGGAAGAACCAGTTTGTGAGGAATCTGAAAATGATATGAAGACGTTTTATAGCAGGCAGGTAAATGCTTTTAGAAAAACAAGACCAGTAGTATATGGAAGATATGGTGAAATTTGTAGTGGAATTGTCTCTCGAGAGGTGCCAAAGCCAGCTAAAATTGTTTCCCTCAGCAAGGTTCTCAAAACTTCCCAAAAATGTAAGGTTGCTGCATATGACAAATTCAGACTAACTACAAAAAAGAAGTGGAAGAAATTGAGCACTGGAACAATTAATGGGTACTCTGGTTTGAAGACTAAGGATAATAGTGGAAACCCAAATGCAGTAGTCTGTGATGAAACAAATGTTGACATATCTAAGGAAGATTTGCGGAAAAGCAACAAGCCATTTGTTATTTGCAAAGTGAAGAGAGATGTCAAAACTAAGCAGGGTGGTAGTATTATAGACAGGATTCATGCTCCATCGAAGCTGAAGGGCAAGGAAACATGGAAACGCAGCATTTATGAACTCACTGCTAAAGatTCAGCTCATGACCGTGATGCTCTATTTGACCATATGTTGCATGAGAATATTTATGAATTTTCCCTCACCAAGGTTTTGAAATGCCTGCCAGAAACTAGAGAGAAGAAGATTTTGGAGGTTGCACAAGATAGGGAGCATGATTTGTGTAACACAAACAGTAAAAGATCTGTTCAAGAACACAGGAGTGCATCCAACATGGACTCTGATGCTTTCTGCTGTGTATGTCGAAGCTCAAGCAGTGATGAAATTAATTATCTGTTGGAGTGTAGTCGATGTCAAATCAGAGCCTGTGTCCTATGTGGTTATGGAGGTGGAGCTATGACTCGAGCCCTACGAACTCACACAATTGCAAAAAGCCTCTTAAAAGTCTGGAATATTAAAAAAGAAGGCATGCCTAAGCATACCATTCCGAAAGAAAGGTTTGAAAAGGAAATGGGTGCCTTCCATTCAACCAAATCTGTGCTTGAAGGTGACCAAAATTGTGTATCAAGGCCTGAAAATATTGAGACATCAACTACAGATATTTTGGAAGTTGAGATTCTTACCGAGCATATGCAACACAAGGCCTACtctaatggtaattttaatgtACAAAACAGTATTATAGCTGGAGTTTTTGATACTACTGTTAAGCAGTGGGTTCACAtggtttgtgggctttggactCCTGGAACACGATGCCCCAATGTAGACACTATGAGTGCTTTTGATGTATCTGGTGTTTCATATCCTAAAGCAGATATGGCTTGTTCCATTTGTAATCGATGGGGTGGATCTTGTATAGAATGCAGGGTTGTTGGTTGCTCTATACAATTTCATCCTTGGTGTGCTCATCAGaagAATCTGCTGCAAAGCGAGGCAGAAGGTGTTGATGGTGATAAGGTGGGATTTTATGGGAGATGTGCACATCATGCTAATGACCTCATATGTCAGGTCAAACATGATCTTATTGGCAATGAGATGGGCTGTCTGGAGAAACTGGAATCCACCTGTGCTAGGACAGAGGGTTACAAGGGGCGTAGACGTGATGGTTTTCAGCATAATTATTTTGGAGTAATAGGCAAGGGAGGATGCCTTGTTCCTCAGGAGCAGTTAAATGCTTGGATCCACATTAATGGGCAAAAATTGTGCTCACAGGGGCATCCAAAATTTCCTGTATCAGATGTTGAATATGATTGCCGGAAAGAATATGGTCGGTACAAACAGGCAAAGGGTTGGAAACACCTTGTTGTTTACAAGTCTGGCATACATGCCCTTGGGCTTTACACTTCTCGGTTCATTTCCCAGGGTGAAATGGTTGTGGAGTATGTTGGTGAGATTGTGGGGCAACGTGTAGCTGATAAAAGAGAGACTGAATATCAATCTGGGAGAAAACTACAGTACAAGAGTGCATGCTACTTTTTCAGGATAGACAAAGAGCATATTATTGATGCCACCCGGAAAGGCGGGATTGCTCGTTTTGTTAATCACTCATGCCTGCCAAATTGCGTGGCTAAAGTGATAAATGTAAGGCATGAAAAGAAGGTTGTCTTCTTTGCGGAGAGGGACATATTTCCTGGTGAAGAGATAACATATGATTACCACTTTAACCACGAAGATGAAGGACAGAAGATTCCTTGTTACTGCAATTCAAAAAATTGCAGGCGCTACCTGAACTGA 6222 0.401 MDRSWNIKCDSTFQQLTHATVSSLPQELRTQMEVNSSHCLYPQVAHGLRSKFDGGMQDPDYLRFPYTINHASGHADAENSFLALLSGPPSLLQCELQELSDPKSGTSSGNYSTASRNFVVDSVGTGTILTSSKGLMTEKLTNHKMQTKVDSFPAITSREMVGLSSGINNVFPDIQRADAYIQPALPVSENAREPHCSTRQRCGAIPLSNLNICSSYIQDMPNMALEESFSKMATPFMSGCPRVFCMGKSGYLLLSNTGLLGIVCSCHCCHMSVLKFCEHSGLHDVNPGDAVRMESGETIAEWQKLYFLKLGIRSPGNENEWDWPEVLSISTTVSLMKSNATNLNMSKSDSFHPFNPSVVSLRKPPDNVMFPKDAHTDYDGALTSKQQTIIHNGCNIPIRGSTGISPRNLHDRADSQFMEFNATPPNLVGTQWDDGSLLTPAYLDTLKRSGNFSVANFPSQNPTSFLKDLGFCVKKSANEGSVGRDATSSNFELRLGQPPQTRNPVLSIIEQQQFDSLVSPPKLQYSMQITQNSAESLGREDELKNNFCYAAGPSNSKMIEEQSKLKLRNFMSGVNNGLSAARAGLETDNVAKGFVSSYSLFNSQSQGQGKTKANENLENDGSVIMSKILHSGSNNLQSNVLWKSDDHRERQLNNSSLVNNKVLDNDKGAACAKEFYANVDPGSRMGKLVGLPSFVRAVGGSSSCCISSLNGKISCHEPSMLVDASTGTNFSYGSNKASSVGQGSHLTVKSLGTQLASRMPAEGMLIGFPFLVSSSTSNQAPTFLEQEGINVDTCLLDENMRLLALTQILELSRQQHTLYLREMNQTQGRSCSFPNGQHCIHEASTSKQGNSDVTLKSPPKKGTCVNHGITDDLEKLASFTGKQPQISFPSPTCNSLNRYCCLSTLEPRPLHSKEKELQCKHSSDLRKEGPSLSLGTSKGITRSCECELSCEWSEQPTDTHLVDKYTCSAQVNCPGNFMLGVGPSPYNIRQQPAKSNFTIDQNASQDKNNQFVQVAGFDDQDLNKLSSNIIEWRAVPSKVRKGVCDVGSLDQPAIVLDCWQGGEQLGNIPAKRLKRTAYLEDSLKEQESSSVSSGCSAPVVTQLSVEVNNVYSSTVDAVDNHSFDNLVVDEGSSIDKGCSSDTLESDRSAEILGSTCDTYLKKAYERVSNDQPCRSLLDELKLLNSLTWKKGRGQNYAEHSENCKTKQSLKVRRGFKGIKQKRKEISMLDAMFPSEIPSSLHNKNAESSEAVDFPSNLSKEIQMYFASDQQRSKNRASFVQPSATGKAAFSSKFLSCKSHLRKHYSDRDGQNSYKTRSDFEAEFHKFTKVSGTRKLRKDFTSESFRHFQKEEPVCEESENDMKTFYSRQVNAFRKTRPVVYGRYGEICSGIVSREVPKPAKIVSLSKVLKTSQKCKVAAYDKFRLTTKKKWKKLSTGTINGYSGLKTKDNSGNPNAVVCDETNVDISKEDLRKSNKPFVICKVKRDVKTKQGGSIIDRIHAPSKLKGKETWKRSIYELTAKDSAHDRDALFDHMLHENIYEFSLTKVLKCLPETREKKILEVAQDREHDLCNTNSKRSVQEHRSASNMDSDAFCCVCRSSSSDEINYLLECSRCQIRACVLCGYGGGAMTRALRTHTIAKSLLKVWNIKKEGMPKHTIPKERFEKEMGAFHSTKSVLEGDQNCVSRPENIETSTTDILEVEILTEHMQHKAYSNGNFNVQNSIIAGVFDTTVKQWVHMVCGLWTPGTRCPNVDTMSAFDVSGVSYPKADMACSICNRWGGSCIECRVVGCSIQFHPWCAHQKNLLQSEAEGVDGDKVGFYGRCAHHANDLICQVKHDLIGNEMGCLEKLESTCARTEGYKGRRRDGFQHNYFGVIGKGGCLVPQEQLNAWIHINGQKLCSQGHPKFPVSDVEYDCRKEYGRYKQAKGWKHLVVYKSGIHALGLYTSRFISQGEMVVEYVGEIVGQRVADKRETEYQSGRKLQYKSACYFFRIDKEHIIDATRKGGIARFVNHSCLPNCVAKVINVRHEKKVVFFAERDIFPGEEITYDYHFNHEDEGQKIPCYCNSKNCRRYLN 2073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3335 2073 SMART set_7 1928 2055 IPR001214 GO:0005515
Sto9g3335 2073 Pfam PHD-zinc-finger like domain 1729 1807 - -
Sto9g3335 2073 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 30 2073 - -
Sto9g3335 2073 SUPERFAMILY SET domain 1919 2069 IPR046341 -
Sto9g3335 2073 ProSiteProfiles Post-SET domain profile. 2057 2073 IPR003616 -
Sto9g3335 2073 CDD ePHD 1728 1825 - -
Sto9g3335 2073 ProSiteProfiles Extended PHD (ePHD) domain profile. 1679 1826 IPR034732 -
Sto9g3335 2073 Pfam SET domain 1941 2048 IPR001214 GO:0005515
Sto9g3335 2073 Pfam Tify domain binding domain 259 305 IPR032308 -
Sto9g3335 2073 CDD SET_SETD1-like 1930 2069 - -
Sto9g3335 2073 Gene3D SET domain 1858 2073 IPR046341 -
Sto9g3335 2073 ProSiteProfiles SET domain profile. 1928 2049 IPR001214 GO:0005515
Sto9g3335 2073 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE TRITHORAX 30 2073 - -
Sto9g3335 2073 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1713 1828 IPR013083 -
Sto9g3335 2073 SMART PostSET_3 2057 2073 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3335 Sto-Chr9 33257334 33269103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3335 1930 2073 C2H2 Transcription Factor Family AT2G23740 33.537 4.62e-16 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sto9g3335 SET 1.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3335 - - gmx:100812602 2061.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3335 9 33257334 33269103 Sto9g3335 9 33257334 33269103 ECH