Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3310 TTGTGTGTTTCTCTTCTGTTTCAATCTGAAATCTGTTTGGGTGGTGTTGCAAGTGTTGGCAACATCTTCCCTGGATTTCAAGGATCTCAAATGAATTGGATTGATAGTGCAGGCATGTTTCTGGAGTCAAACAATGGAGAATTCACCTTTGGCTTCACCACCATCCCTTCTGATATATTCATGTTTGATCAAAATGGTAATGCTTTCTTACAGAAAGGAGCAACTATTGTTTGGTCCACAGATACTGAAAACAAAGGGGTTTCTTCAATGGAATTGCAGGACACAGGAAATCTAGCTTTTCTTGGGAACAATAGTAACATAATTTGGCAGAGTTTCAGCCACCCAACACAAACATTATTGTCAAAGCAGGACTTCACAGAGGGAATGAAACTGATAAGTGATCCTAACTCTAATAACTTGGCCTATGTTCTTGAGATCAAATCTGGTGATCTCATTCTTTCTGCAGATTTCCAAACTCCTCAGCCTTACTGGTCTATGAAGAAGGATAACCGTAAAGTCGTTGATAAAGATGGTGATTTGATGGTGGCTTCAGCAACACTCAGTGAAAATTCCTGGAGATTCTATGATAAAAACATGTCCTTGTTATGGCAATTCATCTTCGCTGAAGATCCAGGGATTAATTCCACTTGGGTTGCTACTTTGGGAAGTGATGGCTTCATCACTTTCTCTAATCTCCAGAGTGAAAAGCTTTCAACAACTAGAATACCACAAAACTCATGCAGTACTCCACAACCTTGTGATTCATACAACATTTGCACAGGTGATAACAATTGTCGTTGTCCTTCTGTTCTTAGCTCTCGTCCTAATTGCAAACCTGGGAATGTTGTCTCTTCTTGTAACGACTCCGAAACTTCCACGGAGCTCATGGAAGCTGACAATGGAATCCATTATTTTGCACTTGATTTTCTCCCACCCTCTTCAACTACTGATTTGGATGGATGTAAAGCTTCTTGCCTTGGAAATTGCTCATGCCTTGTTATGTTCTTCCATAATATTACAAGGAAATGTTTTTTACTGGACAACATAGGAAGCTTCCAGGCTTCTGATACAAATTCTGGGTTTGTGTCTTACATTAAGCTCTCTAAAAGAGGAGGTGGAAGCAGCAATAAGCACACCATAGTTGTTGTGGTGATCATTGTCTTATCAGCATTGCTTGTCCTCTTGTGTGTGGTCTGTGTGGGACTTCGATACAGCAGGCGAAAGAGAAAAATGCTAGATTCTCCTGAGGATGACAATTCAAATGATGACATGTTCTTAGGGAACATAAGGGGCATGCCAATTCGTTTCAGCTATGAAGAAATGAAAGTAGCCACTAATAATTTCTCTGAGAAGCTTGGACAAGGTGGTTTTGGGTCAGTTTATAAAGGTGTTCTACAAGATGGGAGTCAAGTAGCTGTGAAGAAATTAGAAGGCATTGAGCAAGGGAAGAAGGAATTCAGAGCTGAAGTTAGCATCATTGGAAGCATACATCACCATCATTTGGTCAAGCTTAAAGGGTTCTGTGCTGAAGGGTCTCATAGGCTTCTTGCTTATGAGTACATGGCAAATAGGTCATTGGACAAATGGATATTCAAGAAAAATGAGGGAGAATCAGAACTCATGTTGGATTGGAATACCAGGTATAATATAGCACTAGGGACAGCAAAAGGACTTGCTTACCTCCATGAAGATTGTGACTCCAAGATTATACACTGTGACATCAAACCAGAAAATGTGCTTCTTGATGACAAATTCCTAGCCAAAGTTTCAGACTTGGGTTTGGCTAAGCTCATGACTCGTGAACAAAGCCATGTTTTCACAACACTAAGAGGAACCAGGGGATATCTAGCACCAGAGTGGATCACAAACTATGCAATATCAGAGAAAAGTGATGTGTATAGCTATGGGATGGTGTTGCTGGAGATCATAGGAGGGAGGAAGAACTATGATCCTAATGAAACTTCAGAGAAATCCCATTTCCCATCTTTGGCTTTTAAGAGGATGGAAGAAGGGAAGGTGAGAGATATAATAGATTCAAAGATGAAAATAGATGAAACGGATGAAAGGGTTGATAGGGCCATTAAAGTTTCATTGTGGTGCATACAGGAAGACATGTCTCTAAGGCCTTCCATGGCTAAAGTTGTCCAAATGCTTGAAGGTCTCTCAGCTGTTCCAAAGCCACCAACATGTTCTCCATTGGGTTTTCGCCTCTACTCGACTTTAGTTCAACATAACAGTGAAGAAGGCACTTCCTTAGGACACTCAGACTCTAAAAATTTTGATGCTTATCACTCTGCAGTTCGGCTTTCAGGGCCAAGATAG 2322 0.407 LCVSLLFQSEICLGGVASVGNIFPGFQGSQMNWIDSAGMFLESNNGEFTFGFTTIPSDIFMFDQNGNAFLQKGATIVWSTDTENKGVSSMELQDTGNLAFLGNNSNIIWQSFSHPTQTLLSKQDFTEGMKLISDPNSNNLAYVLEIKSGDLILSADFQTPQPYWSMKKDNRKVVDKDGDLMVASATLSENSWRFYDKNMSLLWQFIFAEDPGINSTWVATLGSDGFITFSNLQSEKLSTTRIPQNSCSTPQPCDSYNICTGDNNCRCPSVLSSRPNCKPGNVVSSCNDSETSTELMEADNGIHYFALDFLPPSSTTDLDGCKASCLGNCSCLVMFFHNITRKCFLLDNIGSFQASDTNSGFVSYIKLSKRGGGSSNKHTIVVVVIIVLSALLVLLCVVCVGLRYSRRKRKMLDSPEDDNSNDDMFLGNIRGMPIRFSYEEMKVATNNFSEKLGQGGFGSVYKGVLQDGSQVAVKKLEGIEQGKKEFRAEVSIIGSIHHHHLVKLKGFCAEGSHRLLAYEYMANRSLDKWIFKKNEGESELMLDWNTRYNIALGTAKGLAYLHEDCDSKIIHCDIKPENVLLDDKFLAKVSDLGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPNETSEKSHFPSLAFKRMEEGKVRDIIDSKMKIDETDERVDRAIKVSLWCIQEDMSLRPSMAKVVQMLEGLSAVPKPPTCSPLGFRLYSTLVQHNSEEGTSLGHSDSKNFDAYHSAVRLSGPR 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3310 773 Pfam Protein kinase domain 449 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3310 773 SUPERFAMILY Protein kinase-like (PK-like) 424 719 IPR011009 -
Sto9g3310 773 Pfam D-mannose binding lectin 59 125 IPR001480 -
Sto9g3310 773 Gene3D - 53 127 IPR036426 -
Sto9g3310 773 Gene3D Transferase(Phosphotransferase) domain 1 521 726 - -
Sto9g3310 773 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 56 - -
Sto9g3310 773 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 57 773 - -
Sto9g3310 773 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 56 - -
Sto9g3310 773 ProSiteProfiles Bulb-type lectin domain profile. 26 145 IPR001480 -
Sto9g3310 773 SMART serkin_6 446 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3310 773 SUPERFAMILY alpha-D-mannose-specific plant lectins 55 133 IPR036426 -
Sto9g3310 773 Gene3D Phosphorylase Kinase; domain 1 414 520 - -
Sto9g3310 773 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 57 773 - -
Sto9g3310 773 SMART blect_4 3 115 IPR001480 -
Sto9g3310 773 CDD STKc_IRAK 452 721 - -
Sto9g3310 773 PIRSF SRK 51 768 IPR024171 GO:0004674
Sto9g3310 773 PIRSF SRK 4 62 IPR024171 GO:0004674
Sto9g3310 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 569 581 IPR008271 GO:0004672|GO:0006468
Sto9g3310 773 ProSiteProfiles Protein kinase domain profile. 446 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3310 773 ProSitePatterns Protein kinases ATP-binding region signature. 452 475 IPR017441 GO:0005524
Sto9g3310 773 CDD PAN_AP_plant 313 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3310 Sto-Chr9 33122331 33124742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3310 388 728 Receptor kinase-like Gene Family AT5G20050 43.855 6.10e-97 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sto9g3310 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3310 - - gmx:100791158 1025.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0858 5 5749828 5752251 Sto9g3310 9 33122331 33124742 CCT
Sto9g3310 9 33122331 33124742 Sto9g3310 9 33122331 33124742 ECH
Sto5g0858 5 5749828 5752251 Sto9g3310 9 33122331 33124742 ECH