Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3306 atggagcATTTGCTGCATGGGACGCTTCATGTAACCATACATGAAGTTGATAGGCTGCAGAATGGATGCAACTTCAATTTTTGCAATAAGgaTACACCTAACCGGGGCAAGAAATTTCTAGCTCAAGTGAAGGGTTGTTTGCTATGTCGGCCAGAGATTGTTGGGACCAGGCTATATGCTACAGTTGATTTAGACAAAGCCAGAGTAGGACGAACCAGAATGATAAAACATCTAACTTCCAACCCTAAATGGAATGAGacctttcacatatattgtgcCCACAAGGTATCCAACATTGTGTTCACAGTGAAAGATGGAAACCCCATTGGAGCAACTCTTATTGGAAGAGCCTATGTTCCTGTGGATCAAGTCCTACACAGAGGTTTTGTGAACAGAAGGGTTGAGATATACGATGAAGACCGTCGTCCTATACCAGGTGGTTCCAAAATACATGTTCAGATATCGTACTATGATGTTACTACTGACCGAAATTGGTCTCTAGGAATACAGGATCCCTTTTCTCCTGGGGTTCCTCACACATTCTTCAACCAGAGGAAAAATTGTAAGGTCACTTTGTACCAAGATGCTCATGTTCTTGATGATTTCATGGTGTCCATTCCTTTGTCCGGAGGGATTGAATTTTATAGGCCTAGAAGGTGTTGGGAGGATATTTTTAAAGCTATTATGGATGCTAGGCACTTCATTTACATTACTGGCTGGTCTGTGTATACTGAAATTACCTTAGTAAGGGACAGATCAGAGGGACCAAATTACAATATTACCCTTGGGGAGCTTCTCAAGAGAAAAGCTGAGGAAGGTGTGAATGTGCTTATGCTTGTTTGGGATGACAGAACTTCCAATGAAGAACTGAGAAAAGATGGGTTAATGGAAACACATGATCAGGAAACTGCAGAGTATTTTAGGAACACTAAAGTTCGTTGTGTGTTATGCCCACGTAATCCAGACAATGGAAGAAGCAGAATTCAAGGTTTTGAGGTTTCAACAATGTTCACTCATCACCAAAAGACAGTAATTGTTGATAcatcatcacagAAGAGGAGGATAGTGAGTTTTGTTGGTGGTATTGATCTGTGTGATGGAAGATATGACACACAAGAACATCCTCTATTCTCAACACTTAACACAATCCATCATGATGATTTCCATCAGCCAAACTTTGAAGGAGCTTCCATCAGAAAAGGAGGACCAAGAGAGCCATGGCATGATATTCATTGTAGACTAGAAGGAGCAGTGGCTTGGGATGTGTTGACCAATTTTCACCAAAGGTGGGAGAAGCAAGTTGGGAAGCAATTCCTTCTTCCTCAAGGCAAGCTTGATCAAATTCTAGTGCCTCAATCTTACATAGCATCATCAAATGTTAAAGATGCTTGGACTGTTCAATTGTTCAGATCCATTGATGGTGGTGCTGCTTCTGGCTTCCCTCAAGACCCCAAGAAAGCAGCATCATTAGGCCTTGTTAGTGGCAAAGACAACATCATTGACAGAAGTGTTCAAGATGGTTACATAAATGCTATTAGGCGAGCCAAGAACTTCATCTACATTGAAAACCAGTATTTTCTAGGGAGTTCTTATGGTTGGAAAGCATCTGATATAAAAGTTGAGGATATTGGGGCTCTGCATCTGATACCAAAGGAGTTGTCACTGAAGATTGTGAGTAAGATTGAAGCAGGAGAGAGGTTTTGTGTGTACATTGTGATCCCAATGTGGCCAGAAGGCATACCTGAGAGTGCTTCAGTTCAAGCAATATTAGATTGGCAAAGGAGGACAATGGAGATGATGTATGTTGATATTGCAGAAGCCATTGGGAGAAAAGGAATTAGAGCACACCCTAGGGACTACCTGACCTTCTTCTGCCTTGGAAATAGAGAGATTCAGAGGCGTGGAGAATATATTCCTCCAGAGAGACCAGAGCCTGATAGTGATTACAGTAGATCACAAAAATGCAGACGCTTCATGATCTATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATCATCGGTTCTGCCAACATAAACCAGAGATCAATGGATGGAGGAAGGGACAGTGAGATTGCAATGGGGGCATTCCAGCCATATCATCTAACATCGTATGGATCAGCAAGGGGTCAGATATATGGGTTCAGAAGGGCATTGTGGTATGAGCATATGAGAGATCATGCAAAAACACAAGTGCTTGAGCATCCAGAAGGCGAAGAGTGTGTGAAGTTAGTGAATTATGTTGGTGACATGAACTGGAAACTATACTCAAAGGAAACATTTGATGAAGATGATTCAAATAAGTTTTCTCATCTCTTGCGTTACCCCATAGATATAACCAAGGATGGGCATGTAACAACACTACCAGAATTCCAGTTCTTTCCTGACACCAAGGCTCATGTTCTGGGCAAAAAATCTGAATACCTTCCTCCTATTCTTACCACCTAG 2454 0.4091 MEHLLHGTLHVTIHEVDRLQNGCNFNFCNKDTPNRGKKFLAQVKGCLLCRPEIVGTRLYATVDLDKARVGRTRMIKHLTSNPKWNETFHIYCAHKVSNIVFTVKDGNPIGATLIGRAYVPVDQVLHRGFVNRRVEIYDEDRRPIPGGSKIHVQISYYDVTTDRNWSLGIQDPFSPGVPHTFFNQRKNCKVTLYQDAHVLDDFMVSIPLSGGIEFYRPRRCWEDIFKAIMDARHFIYITGWSVYTEITLVRDRSEGPNYNITLGELLKRKAEEGVNVLMLVWDDRTSNEELRKDGLMETHDQETAEYFRNTKVRCVLCPRNPDNGRSRIQGFEVSTMFTHHQKTVIVDTSSQKRRIVSFVGGIDLCDGRYDTQEHPLFSTLNTIHHDDFHQPNFEGASIRKGGPREPWHDIHCRLEGAVAWDVLTNFHQRWEKQVGKQFLLPQGKLDQILVPQSYIASSNVKDAWTVQLFRSIDGGAASGFPQDPKKAASLGLVSGKDNIIDRSVQDGYINAIRRAKNFIYIENQYFLGSSYGWKASDIKVEDIGALHLIPKELSLKIVSKIEAGERFCVYIVIPMWPEGIPESASVQAILDWQRRTMEMMYVDIAEAIGRKGIRAHPRDYLTFFCLGNREIQRRGEYIPPERPEPDSDYSRSQKCRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGGRDSEIAMGAFQPYHLTSYGSARGQIYGFRRALWYEHMRDHAKTQVLEHPEGEECVKLVNYVGDMNWKLYSKETFDEDDSNKFSHLLRYPIDITKDGHVTTLPEFQFFPDTKAHVLGKKSEYLPPILTT 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3306 817 Gene3D Endonuclease Chain A 212 448 - -
Sto9g3306 817 Pfam Phospholipase D Active site motif 335 368 IPR001736 GO:0003824
Sto9g3306 817 Pfam Phospholipase D Active site motif 659 685 IPR001736 GO:0003824
Sto9g3306 817 CDD C2_plant_PLD 4 157 - -
Sto9g3306 817 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 658 685 IPR001736 GO:0003824
Sto9g3306 817 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 335 368 IPR001736 GO:0003824
Sto9g3306 817 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Sto9g3306 817 Gene3D C2 domain 5 166 IPR035892 -
Sto9g3306 817 PANTHER PHOSPHOLIPASE D ALPHA 3 2 817 - -
Sto9g3306 817 PANTHER PHOSPHOLIPASE D 2 817 IPR015679 -
Sto9g3306 817 SUPERFAMILY Phospholipase D/nuclease 502 727 - -
Sto9g3306 817 SMART C2_3c 8 133 IPR000008 -
Sto9g3306 817 SMART pld_4 335 368 IPR001736 GO:0003824
Sto9g3306 817 SMART pld_4 658 685 IPR001736 GO:0003824
Sto9g3306 817 PIRSF PLD_plant 1 817 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Sto9g3306 817 Pfam C2 domain 7 127 IPR000008 -
Sto9g3306 817 Pfam Phospholipase D C terminal 733 807 IPR024632 -
Sto9g3306 817 Gene3D Endonuclease Chain A 475 699 - -
Sto9g3306 817 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 158 IPR035892 -
Sto9g3306 817 SUPERFAMILY Phospholipase D/nuclease 162 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3306 Sto-Chr9 33087612 33095510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3306 2 817 Phospholipase D Gene Family (Wang group) AT3G15730 62.967 0.0 1071
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3306 K01115 - gmx:100791688 1194.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3306 9 33087612 33095510 Sto9g3306 9 33087612 33095510 ECH