Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3295 ATGGAATCAGAGAGGAGGAGAGAGCGAGGATCTGCTGCTTCTCCACCAGTGGATCCTACCAGTATCCCAACCCTCGAGGCTTATGCTAAATCttgtggaggaggaagaagaatgcACGACGCAGCAACAAGTTCCGTTGCCGCAAGCTCTCTGCCGTCTAGCAGTGAAAAATCTTCAAGTTCTGCTCTCCAGCTTGAGGTTAAAGAAGGTCTCGAGAGTGACGAGGAGATCAGAAGGGTGCCGGAGATCGGTGTTGAAACCGCCGGAACGTCAGGATCTCGTCCAGACGCCGGTTCAGGTGGCGGTCCAGACCGGGTTCAAGGAACAGGAGAGGGTCAAAGGAAGAGAGGGAGAAACCCAGCCGATAAAGAAAGCAAGCGGCTAAAGAGGCTACTTAGGAACAGAGTTTCAGCACAGCAAGCAAGGGAGAGGAAGAAGGCATACTTGATTGACTTGGAAACTAGAGTTAAGGAGTTGGAGAAGAAGAATTCGGAGCTGGAAGAGAGGCTGTCCACTATGCAGAACGAGAATCAGATGCTAAGACATATATTGAAGAACACAACAGCTAGCAGGAGAGGAGGCACTGCTGCTGGTGCCAATGCTGACGGAACATTATGA 618 0.4919 MESERRRERGSAASPPVDPTSIPTLEAYAKSCGGGRRMHDAATSSVAASSLPSSSEKSSSSALQLEVKEGLESDEEIRRVPEIGVETAGTSGSRPDAGSGGGPDRVQGTGEGQRKRGRNPADKESKRLKRLLRNRVSAQQARERKKAYLIDLETRVKELEKKNSELEERLSTMQNENQMLRHILKNTTASRRGGTAAGANADGTL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3295 205 MobiDBLite consensus disorder prediction 43 66 - -
Sto9g3295 205 MobiDBLite consensus disorder prediction 109 143 - -
Sto9g3295 205 MobiDBLite consensus disorder prediction 1 143 - -
Sto9g3295 205 SUPERFAMILY Leucine zipper domain 126 184 IPR046347 GO:0003700|GO:0006355
Sto9g3295 205 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 129 144 IPR004827 GO:0003700|GO:0006355
Sto9g3295 205 MobiDBLite consensus disorder prediction 68 82 - -
Sto9g3295 205 Gene3D Single helix bin 145 186 - -
Sto9g3295 205 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 43 192 IPR044280 GO:0000981|GO:0045944
Sto9g3295 205 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 43 192 - -
Sto9g3295 205 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 124 187 IPR004827 GO:0003700|GO:0006355
Sto9g3295 205 Pfam bZIP transcription factor 123 183 IPR004827 GO:0003700|GO:0006355
Sto9g3295 205 CDD bZIP_HY5-like 127 178 - -
Sto9g3295 205 Coils Coil 121 183 - -
Sto9g3295 205 SMART brlzneu 122 186 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3295 Sto-Chr9 33021453 33027904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3295 38 183 bZIP Transcription Factor Family AT5G11260 74.150 5.28e-56 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto9g3295 bZIP_1 2.5e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3295 K16241 - jre:108985133 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3295 9 33021453 33027904 Sto9g3295 9 33021453 33027904 ECH