Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3292 atggatatggaTTTCCTTCAAGAACCTGATgaaGATTCGTTCGAGAAATCTGATTTATTTGCGACGCCAGCGTCAGATTTTCTTCCTCAAATTCAAAACGATTATTCTGCTTCGCTCAATGTATTCTCATCGCCGTTTATTCATTCTCAACGTTCAGACATTCCTCCAATAATCGATCACAATGGAGTGACTACTATTACTACTACTCCTATTGCCGATTCTGATCATTCTACTACGTTAGGTAGTGACCATTCATCAATGGAAAACGATGCACATTTGGATTCTGCTCTGTTCAATGTTGATGAGTTTTTGGTTGACTACCAACCTCTAAACTCCCAAGAACCTCAACGCACTAACCCTCagaTGGAAAATGATGAGGAGGGTGCAACACAGAATGAAGTATTTGGTGAACCACTTGCTCGGCACCCTTCAGCATGTGAGGCGTGTTATTTGGAGCAGCGCCGCCCCAGGAATTGTTGTACTTCTATATATATGCCTCGCCCTCAAACTACAAATATCACAGATGCTCTACAATTCAACCAACCAACAACCAACCAAAACAAAAGGACTAGGCAGACTACTACATCAACCAACATTAATGGTCATGATAGTGCTCATCAAATCTGCCGTTGTGCCAGGACTGCATGTTTAAAACTTTATTGCGATTGTTTTACCGCGGGAATCTACTGCAGTGACGAATGTGGTTGCATAGGCTGTAGAAATAAACCAGAATATGGAGTTGTAGTTATGGAGACAAAGGAAAAAATCGCATCCCATAACCCACTCGCATTTGTTTCTAAGATTGGTAATGTTGGATGCAGCAATATATGTCGATGCGAGGGATGTGAAAACAGCTATGGCGTGAGACTAAATTCCAGTATTGAAACGTTGACAAACCAGAGACATGCATTTCATCATCAACGAACACCAACGTCGCTAATCCAAGACCAAGGACAAAGATATGTACAATCCCCACAAGTAGAGAGAGTTTTAGAGACAAGTGTGATTCCGGAAGGGAATGGATCAAGGTTTAGAAACGTGAATAACAACTACAATATGGGAATAGTGAATAATAATGAAGCATCAGTGATACGTAATAGTGGCCTCTTGTCTGCTTCGAATTTGCCTATGCCACATCGTTCTGGATTGGGTAGCGGAATAAGTAATTATGGAATTGCACAAAACCCGTTCTATGATACAGAATTGGAAAATATTAGCCGTTGGATTCGGCAGAAAATATTTCGGGTGGAGGAAATTGAGAAGAGAAAGAGGGGTTTTGATCACGCCAATGCCAATGCCAATGCCTTCTTAAACACATCCTTCCGTCCCAATGCTGCTTCTAATAATGGTCACAATAATGATCATCAGGATTCAACTACTCCTACCCCAAACTTGGATAGTTAA 1404 0.4074 MDMDFLQEPDEDSFEKSDLFATPASDFLPQIQNDYSASLNVFSSPFIHSQRSDIPPIIDHNGVTTITTTPIADSDHSTTLGSDHSSMENDAHLDSALFNVDEFLVDYQPLNSQEPQRTNPQMENDEEGATQNEVFGEPLARHPSACEACYLEQRRPRNCCTSIYMPRPQTTNITDALQFNQPTTNQNKRTRQTTTSTNINGHDSAHQICRCARTACLKLYCDCFTAGIYCSDECGCIGCRNKPEYGVVVMETKEKIASHNPLAFVSKIGNVGCSNICRCEGCENSYGVRLNSSIETLTNQRHAFHHQRTPTSLIQDQGQRYVQSPQVERVLETSVIPEGNGSRFRNVNNNYNMGIVNNNEASVIRNSGLLSASNLPMPHRSGLGSGISNYGIAQNPFYDTELENISRWIRQKIFRVEEIEKRKRGFDHANANANAFLNTSFRPNAASNNGHNNDHQDSTTPTPNLDS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3292 467 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 172 268 IPR044522 GO:0003700
Sto9g3292 467 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 270 346 IPR044522 GO:0003700
Sto9g3292 467 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 270 346 - -
Sto9g3292 467 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 172 268 - -
Sto9g3292 467 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 207 242 IPR005172 -
Sto9g3292 467 MobiDBLite consensus disorder prediction 440 467 - -
Sto9g3292 467 ProSiteProfiles CRC domain profile. 205 312 IPR005172 -
Sto9g3292 467 SMART CXC_2 204 245 IPR033467 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3292 169 295 CPP Transcription Factor Family AT4G14770 32.353 7.75e-22 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Sto9g3292 TCR 1.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3292 K21776 - mnt:21389081 110.538