Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3271 ATGGCTCAGCACAACAATGGCGGCAGAAATAGTACGAGCCAGGAGCTTGTGAAGCCTGTCTTCCATGATTTTCTCGGCATGAAGCCCACTGATTCCCTTGTCGTTATGCCCCCTAAAACCGCCGATGTCAGGCTGTCAGAGGCGTCTCCGTCACCGTCGTCGGCATCGGCGTCTATTGCCGCCTCTTCTGGCGGTCCCCGAGGCCCCTTCTCAACCACATCGGATATCGGCTCCGTGTGGTATCTTTCTGAGGGTCTAGCCGAGGTCAGAATTGCAGTGGAAAGACAGGTAGGAAATCATCTCGAGGGAGTTCCATTTTATGGCTCGAGGAGTGATTTTTCTGGCACTGGGCTAGCTAACAGGCTAGTAGGAAACAAGAGAAGTAATTCTGAGTCCATTTTTATGGGTTCCTCCCGAGATGCCTTTCAAATGGTCCCTGACTCCTTTCGAAACTCACACTTGATGAAGatgctTCGGAGTACAGCTGGAGGAGAACATCATAGAAGGTCCGTTGATGATGAAATGTTTCTTGGTATGCAGCCACTGAAGGCAACTTCAGCTTCTCAGATATTTCAGCCTCCTGCTGGAACTAAGATTGATTCCAATAAATGGGAGCGATCTGTCATAATGAACGCTGGCCCTTCTGTGCAGCATCCACCACGAGGGGGTCAATTAACACCTTTTATGCACCAGATAGCTTCAAACAAGATCAGGGATCCCAATATTGGCCCTTCATTTATTTCTCAGTTAGCGGCTGATGAAGGGTCTAGAACAGGAATCAAGGGCCCTGGAATTTTGAGTTCTATGAACACAGCAACTGCTGCCACTGAGAAAACTTCATCCGCAACGCTTCATGGCGGCGTCAAGCCGAAGGCCGTgtctaatataataatagacTTAGATTCTTCCACACCTCCAAGCCGACAAGAGTTAAGATCAGCAAGCTGTCAGATGACAATTTTCTATGGAGGTCAAGCTCATGTGTTTGATGATGTCCACCCTAATAAGGCAGATATAATAATGAGCTTAGCAGGATCAAATGGTGGAAGTTGGTCGACAACCACAAGTTGCTCACCCAAACCTATAAGCCTGCGTCATGATACTGCAGATATTGAAGCTGCCAATGCCAAGCTTCAAGCCATATCCACTCCACCAGGGCCTACTACTCTTGGCAGCGTTGTAGCTAAAGATACCAGAAACCCAGTTCAAATGGTGGATCCCACTTCTCAAGACAAAAGAACGCTGTGA 1248 0.4752 MAQHNNGGRNSTSQELVKPVFHDFLGMKPTDSLVVMPPKTADVRLSEASPSPSSASASIAASSGGPRGPFSTTSDIGSVWYLSEGLAEVRIAVERQVGNHLEGVPFYGSRSDFSGTGLANRLVGNKRSNSESIFMGSSRDAFQMVPDSFRNSHLMKMLRSTAGGEHHRRSVDDEMFLGMQPLKATSASQIFQPPAGTKIDSNKWERSVIMNAGPSVQHPPRGGQLTPFMHQIASNKIRDPNIGPSFISQLAADEGSRTGIKGPGILSSMNTATAATEKTSSATLHGGVKPKAVSNIIIDLDSSTPPSRQELRSASCQMTIFYGGQAHVFDDVHPNKADIIMSLAGSNGGSWSTTTSCSPKPISLRHDTADIEAANAKLQAISTPPGPTTLGSVVAKDTRNPVQMVDPTSQDKRTL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3271 415 MobiDBLite consensus disorder prediction 381 415 - -
Sto9g3271 415 ProSiteProfiles Tify domain profile. 311 346 IPR010399 -
Sto9g3271 415 Pfam tify domain 314 345 IPR010399 -
Sto9g3271 415 MobiDBLite consensus disorder prediction 46 69 - -
Sto9g3271 415 SMART tify_2 311 346 IPR010399 -
Sto9g3271 415 MobiDBLite consensus disorder prediction 44 69 - -
Sto9g3271 415 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 76 414 IPR040390 -
Sto9g3271 415 PANTHER PROTEIN TIFY 8 76 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3271 Sto-Chr9 32887583 32890690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3271 1 344 Tify Gene Family AT4G32570 37.326 4.45e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sto9g3271 tify 1.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3271 - - gmx:100819293 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0800 5 5435421 5439801 Sto9g3271 9 32887583 32890690 CCT