Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3260 ATGTCCGTCAAATCGACGCAATCATCGTTTCGGGATCGAACGCAAGAATTTCAGAGTATTGCGGAGAGGCTAAAGAAGTCATTAACTTCAGGAGCAGGGCCAAATGGGCCAAGCAGTAGTTCAAGATCGGATGAACAGCGATCTAATATTGCAATTCAGTCAGAGTTCAATAGGAGGGCTTCCAAGATTGGATATGGGATACACCAGACGTCACAGAAGCTTGCTAAGCTGGCTAAGAtGGCAAAAAGGACTTCGGTCTTTGATGACCCCACAATGGAAATCCAAGAGCTTACAGCAATCATTAAGCAAGATATTACGGCACTGAACTCTGCCGTCGTGGATCTTCAGCTACTGAGCAACTCTAGAAACGAGAGTGGAAATATCTCTAGTGACACCACAAGTCATTCAACCACAGTTGTGGATGACCTTAAAAATAGACTGATGGGTGCAACAAAAGAGTTTAAGGAAGTCCTAACCATGCGAACTGAGAACTTGAAAGTACATGAAAACAGAAGACAGTTGTTTTCTTCCACTGCTTCAAAGGATTCTGCCAACCCTTTTGTCCGTCAGCGTCCATTAGCTTCAAGAATGGCTGCTAGCACTTCTAATGCCCCTGCTCCCCCCTGGTCTAGTGGATCACCATCTTCATCTCAGTTGTTCCCTAAgAAGCAGGAGGATGGGGAGAGTCAACCTTTGCTACAGCAGCAGCAACAGCACCATCAGCAGCAGATGGTTCCATTGCAAGATAGTTACATGCAAAGCAGAGCAGAAGCTCTTCAGAATGTCGAGTCCACCATTCATGAGCTGAGCAACATCTTTAACCAATTGGCAACACTTGTTTCCCAACAAGGAGAGATTGCCATCAGGATTGATGAGAACATGGATGATACATTGGCAAACGTAGAGGGAGCACAGGGGGCCTTATTAAAGTATCTGAACAGCATATCTTCTAATAGGTGGCTGATGATCaagatattttttgtattaatatttttcCTTATGGTTTTCCTATTTTTTGTGGCATAG 1026 0.4366 MSVKSTQSSFRDRTQEFQSIAERLKKSLTSGAGPNGPSSSSRSDEQRSNIAIQSEFNRRASKIGYGIHQTSQKLAKLAKMAKRTSVFDDPTMEIQELTAIIKQDITALNSAVVDLQLLSNSRNESGNISSDTTSHSTTVVDDLKNRLMGATKEFKEVLTMRTENLKVHENRRQLFSSTASKDSANPFVRQRPLASRMAASTSNAPAPPWSSGSPSSSQLFPKKQEDGESQPLLQQQQQHHQQQMVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEIAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3260 341 MobiDBLite consensus disorder prediction 194 245 - -
Sto9g3260 341 PANTHER SYNTAXIN-32-LIKE 2 340 - -
Sto9g3260 341 ProSitePatterns Syntaxin / epimorphin family signature. 255 294 IPR006012 GO:0005484|GO:0006886|GO:0016020
Sto9g3260 341 SMART tSNARE_6 244 311 IPR000727 -
Sto9g3260 341 Gene3D - 51 304 - -
Sto9g3260 341 CDD SNARE_syntaxin5 252 330 - -
Sto9g3260 341 MobiDBLite consensus disorder prediction 21 47 - -
Sto9g3260 341 MobiDBLite consensus disorder prediction 195 245 - -
Sto9g3260 341 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 8 26 IPR021538 -
Sto9g3260 341 Pfam SNARE domain 285 337 IPR000727 -
Sto9g3260 341 SUPERFAMILY t-snare proteins 54 304 IPR010989 GO:0016020|GO:0016192
Sto9g3260 341 PANTHER SYNTAXIN 2 340 IPR045242 -
Sto9g3260 341 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 249 311 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3260 Sto-Chr9 32801784 32805450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3260 1 341 SNARE and Associated Proteins AT3G24350 65.565 3.00e-148 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3260 K08490 - mnt:21390779 495.352