Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3245 ATGCCGGGATTGACCTGCAACGCTTGCAACAAAGAATTCGAGGACGATGCTGAGCAAAAGCTTCATTACAAGTCTGAGTGGCACCGCTACAATCTCAAGCGCAAGGTGGCTGGGGTTCCTGGGGTGACAGAAGCATTATTCCTGGCAAGACAATCTGCAGTTGCTAAAGAGAAAGATAAATTAAGTGAAACCCCCATGCTCTATAGTTGTGGCCTTTGTGGCAAAGGTTACAAAAGTTTTAAAGCTCATGCTGAGCATCTTAAATCCCGTGGTCATTTGATGCGGGCTTCTCAAGAAACTAGTCCTTCAAATGAGAAGGCAATAATTAAGCCGCTTCCACCACGTGTTGTGAATAGACCACCTCCCAACAAAGAGGTGGACATAGCTGAAAGTGATGAAAGTGATGAAAGTGAATGGGAAGAGGTAGATCCTGAAGATGATTTGATTAATGATGCTGCTTCGTCTTTAACTGGCTTGAATATGAAGGAGCATGAAGACACTGTAGATatggatgaagaagatgatcatGATTATGAGGATTTGGATCCTTCGTGCTGCTTTATGTGTGATAAAAAACACAATACTCTTGAAAGTTGCATTGTTCACATGCACAAGCAGCATGGATTCTTCATTCCAGATGTTGAATTTTTGAAGGATCCAAAAGGCTTGCTCATATATCTAGGCCTTAAGGTCAAGAAGGACTATATGTGTCTTTACTGCAACGATAGATGCCATCCTTTCAACAGCCTAGAAGCAGTAAGGAAACATATGGCGGCAAAAAGTCACTGTAAAGTGCAttatggtgatgatgatgaggaggaggaagcAGAGTTGGAAGAATTCTATGATTATAGCAGCAGTTATTTGGATGAGCAAGGCAAGCAGCTGGTTGCATTAGGGGATGCAGTCAACAACATAGAACTTGGTAGTGGTGGGTCTGAGCTTGTAATCACTAGGAAATCTAATGAAGGAATATCAACCAGAACACTTGGTTCCCGTGAATTTTTGCGTTATTATCGTCAGAAACCTCGCCCATCACCTGCAAATAATATGGCTGTTACTGCTGCATTAGCTTCAAGgtacaGGAGCATGGGTTTGGCCACCGTCCAATCAAGACAGCATTTGGTGAGGATGAAAGTACTGAAGCAAATGAACAGGTCTGGTGTGGAGACCATGCGTAATAAAATAGGGATGAAAAGTAATGTCATCCGGAACCTGCCAAATAATGTTCCATATTAG 1239 0.4068 MPGLTCNACNKEFEDDAEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSAVAKEKDKLSETPMLYSCGLCGKGYKSFKAHAEHLKSRGHLMRASQETSPSNEKAIIKPLPPRVVNRPPPNKEVDIAESDESDESEWEEVDPEDDLINDAASSLTGLNMKEHEDTVDMDEEDDHDYEDLDPSCCFMCDKKHNTLESCIVHMHKQHGFFIPDVEFLKDPKGLLIYLGLKVKKDYMCLYCNDRCHPFNSLEAVRKHMAAKSHCKVHYGDDDEEEEAELEEFYDYSSSYLDEQGKQLVALGDAVNNIELGSGGSELVITRKSNEGISTRTLGSREFLRYYRQKPRPSPANNMAVTAALASRYRSMGLATVQSRQHLVRMKVLKQMNRSGVETMRNKIGMKSNVIRNLPNNVPY 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3245 412 SMART c2h2final6 184 207 IPR013087 -
Sto9g3245 412 SMART c2h2final6 68 92 IPR013087 -
Sto9g3245 412 SMART c2h2final6 4 28 IPR013087 -
Sto9g3245 412 SMART c2h2final6 235 262 IPR013087 -
Sto9g3245 412 SUPERFAMILY beta-beta-alpha zinc fingers 171 284 IPR036236 -
Sto9g3245 412 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Sto9g3245 412 SMART ZnF_U1_5 1 35 IPR003604 GO:0003676|GO:0008270
Sto9g3245 412 MobiDBLite consensus disorder prediction 129 147 - -
Sto9g3245 412 MobiDBLite consensus disorder prediction 91 147 - -
Sto9g3245 412 Pfam C2H2 type zinc-finger (2 copies) 186 287 IPR041661 -
Sto9g3245 412 SUPERFAMILY beta-beta-alpha zinc fingers 3 36 IPR036236 -
Sto9g3245 412 ProSitePatterns Zinc finger C2H2 type domain signature. 70 92 IPR013087 -
Sto9g3245 412 PANTHER ZINC FINGER PROTEIN 622 1 412 IPR040025 -
Sto9g3245 412 PANTHER ZINC FINGER PROTEIN-RELATED 1 412 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3245 1 412 C2H2 Transcription Factor Family AT4G31420 63.221 4.99e-180 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3245 K14816 - zju:107420801 631.713