Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3236 ATGGCGGTGGAGCTGATGGGGTTCCCAAAAATGGATGAGCAGAAGGCAATACAGGAGGCCGCATCAGAAGGCTTGAAAGGCATGGAGCACATGATCCGTCTCCTTTCCCATCAACCCAATCACATCGATTGTACGGACCTCACTGATGTCACCGTTTCCAAGTTCAAAAAACTCATTTCCCTTCTCAACCGAACCGGTCACGCCCGGTTCAGGCGAGGGCCGATTCCTTCGAATTCCTCCTCCTCGTCTCCTTCCACATCCAACTCCCCGCCGCCGCCGGCAACCACCTGCGTCTCGATTCCTCGTTTGCAGACTCTGAATCTATCGCCGCCGCAGTTCACCTCTCCGGCGGCAACCGTGCATCACGCGGCGCCGAGTTTCGTTCCGACTCAGGCGCCGCAGAGTTTGACTCTTGATTTTACAAAACCTAACATCTTGAGCTCCAAATCCAAATCCGTAGAGCTCGAATTCTCGAAGGAGACTTTCAGCGTCTCGTCGAACTCGTCGTTCATGTCGTCCGCCATCACCGGAGACGGCAGCGTTTCCAACGGCAAGCAGGGATCGTCGATCTTCTTGACTCCGGCAGCGCCGACGGTTTCCGGCGGAAAGCCACCGCTCTCGTCGGCGCTGTCGAAGAAACGATGCCATGACCACCGCGAGCACTCGGAGGACGCGTCCGGCTCTAGCAAGTGCCACTGCGCTAAGAGAAGGAAAAACCGGGTGAAGAAGACGGTGAGGGTGCCGGCGATAAGTTCGAAGATAGCGGATATTCCGGCGGACGAGTACTCTTGGAGGAAGTACGGTCAGAAACCGATCAAGGGGTCACCGTACCCACGGGGATATTATAAGTGCAGCACAGTGAGAGGGTGTCCGGCGAGGAAGCACGTGGAGAGGGCGACGGATGATCCAACGATGTTGATAGTGACGTACGAGGGGGAGCACCGTCACGCAGTTCAGGGTGCGATGCAGGAGAACGTAGCCTCCGGTGGtgtggGTGATGATGAGGCTAAGAACTAG 1017 0.5644 MAVELMGFPKMDEQKAIQEAASEGLKGMEHMIRLLSHQPNHIDCTDLTDVTVSKFKKLISLLNRTGHARFRRGPIPSNSSSSSPSTSNSPPPPATTCVSIPRLQTLNLSPPQFTSPAATVHHAAPSFVPTQAPQSLTLDFTKPNILSSKSKSVELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGSSIFLTPAAPTVSGGKPPLSSALSKKRCHDHREHSEDASGSSKCHCAKRRKNRVKKTVRVPAISSKIADIPADEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPTMLIVTYEGEHRHAVQGAMQENVASGGVGDDEAKN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3236 338 MobiDBLite consensus disorder prediction 69 98 - -
Sto9g3236 338 Pfam WRKY DNA -binding domain 260 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g3236 338 Pfam Plant zinc cluster domain 212 256 IPR018872 -
Sto9g3236 338 Gene3D WRKY domain 247 318 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g3236 338 MobiDBLite consensus disorder prediction 192 238 - -
Sto9g3236 338 PANTHER WRKY PROTEIN 10 321 - -
Sto9g3236 338 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 321 IPR044810 GO:0003700
Sto9g3236 338 MobiDBLite consensus disorder prediction 210 231 - -
Sto9g3236 338 SUPERFAMILY WRKY DNA-binding domain 256 318 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto9g3236 338 SMART WRKY_cls 258 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto9g3236 338 ProSiteProfiles WRKY domain profile. 253 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3236 Sto-Chr9 32639139 32640662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3236 1 326 WRKY Transcription Factor Family AT2G24570 61.424 1.86e-120 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto9g3236 WRKY 6.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3236 - - cam:101509842 444.506