Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3232 ATGGGGTATTCGAAGAAGCTACCGGACCGGAAGGATAATGGTGGTGGTGTGAACGGAACAGTGGCAGTGGCAATAGAAAAAGACAAGGGAAGCCAACACGCAATCAAATGGGCAATTGACCATCTTCTCACCAAAGGTTCAACCGTACTTCTTATTCATGTCAATGTGAAGGGAGCTTCTCATACCCCAAGGTCAGGGACAAAAAATGTGTCCAACGATGGTTCAGTGGCATGCAAAGACCCTGATGACCAAACCAAGGAGATTTTTCTCCCATATCGTATCTATTGTACAAGGAGAGACGGAAATTTTTTCATCAGAAGATTCAAGGTGGCTGATATTCCAGGAGCGGTGGCAAAAGGGGCACCCGATTTCTGTACTGTCTATGTTGTTTCTAAAGAAAAGATTCAATCAATGCGATCTGCCTCTCGTCCTGCTCCATCCATTTCCCCTCTTGCCTATGAACTTAATCAAGCTAATATTAAGTCAGACCTTTTAGAACCACGTATGCCACCAACTAATTATGATATAGGGATGTCCATCCCTGGGATATCACTTAACTCAGAGACAGATGAAGACAGTTGCTTTGAGTCACTGCAGTACAGAAGGCAATCTGTGGATATCAGTTCTCTTCCTGAAACCTTACCAGTCTTAACAGATAGTAAAATACTTTCTTCTAGTACATTGAATGCCACGGATGATCTAGAGACTGAaatgaggagactaaagttggAGCTGAAGAAAACGATGGAAATGTATAGCAGTGCCTGTAAAGAAGCACTTACAGCACAGCAGAAGACAATAGAACTTGAGCGTTGGAAAAGGGAGGAGGAGAGGAGATTGGAAGAGGCAAGGCTCGCTGAGGAAGCAGCCTTAGCAATTGCAGAAAGGGAGATGGCCAAATCCAAAGCAGCCCTTGAGGCTGCTGAAGCTCAAAAGAGGATTGCAGAACTAGAAGCGCAAAAGAGAGTTGTTGCAGAAATGAAAGCACTCCAAGAATcagaagagaaaagaagagcACTTGATGCTTTAATGAACACAGATGTCAGGTATAGAAAGTATTCAATCGAGGAGATTGAAGCTGCAACAGAGTTCTTCGCAGACTCCCGAAAGATTGGAGAAGGGGGTTATGGTCCAGTATTCAAATGCCATCTAGACCATACCCCAGTGGCAGTGAAGGTTCTGCGTCCTGATGCAGCACAAGGAAGGTCACAGTTTCAACAAGAGAGAAAACCAGAGCCTTTGGTGCACAGAGACTTGAAACCAGCTAACATCTTGCTTGACAGCAATTATGTATCCAAGATCAGTGATGTAGGGTTAGCGAGGCTAGTTCCACCATCCGTGAATGACAGTGTGACACAATATCGTATGACATCGACGGCTGGCACTTTCTGCTACATAGATCCAGAGTACCAGCAGACAGGAATGTTGGGAGTGAAATCTGACATATACTCCCTTGGGATCATTTTCCTGCAGATTTTAACAGCAAAGCCACCCATGGGTTTGACCCATATTGTGGAGAGAGCAATTGAGGAAGGAGAATTTGCTCAGATTCTGGATCCAACAGTGCCTGACTGGCCAGTACAGGAGGCCTTGAGCCTTGCAAGTATGGCACTCAAGTGTTCAGAGTTGAGGCGAAAAGACAGACCTGATCTTGCCAAGGTTGTCTTGCCAGAACTTGACAGATTGAGAGCACTTGGTGAAAGGTCTAATTACCTTGCAGCCCTAGGCAGCTTGATGGCTCCATGCAACCACACCCAAATTTCTGTTCTGCAACGGGAGGGAGTGAGTCGTCCATTTTATCCTGAGGAGAACACAATAAACAAATCATGCCCAGTTTGA 1839 0.4432 MGYSKKLPDRKDNGGGVNGTVAVAIEKDKGSQHAIKWAIDHLLTKGSTVLLIHVNVKGASHTPRSGTKNVSNDGSVACKDPDDQTKEIFLPYRIYCTRRDGNFFIRRFKVADIPGAVAKGAPDFCTVYVVSKEKIQSMRSASRPAPSISPLAYELNQANIKSDLLEPRMPPTNYDIGMSIPGISLNSETDEDSCFESLQYRRQSVDISSLPETLPVLTDSKILSSSTLNATDDLETEMRRLKLELKKTMEMYSSACKEALTAQQKTIELERWKREEERRLEEARLAEEAALAIAEREMAKSKAALEAAEAQKRIAELEAQKRVVAEMKALQESEEKRRALDALMNTDVRYRKYSIEEIEAATEFFADSRKIGEGGYGPVFKCHLDHTPVAVKVLRPDAAQGRSQFQQERKPEPLVHRDLKPANILLDSNYVSKISDVGLARLVPPSVNDSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAKPPMGLTHIVERAIEEGEFAQILDPTVPDWPVQEALSLASMALKCSELRRKDRPDLAKVVLPELDRLRALGERSNYLAALGSLMAPCNHTQISVLQREGVSRPFYPEENTINKSCPV 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3232 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Sto9g3232 612 CDD STK_N 20 132 - -
Sto9g3232 612 Gene3D Phosphorylase Kinase; domain 1 328 408 - -
Sto9g3232 612 Gene3D Transferase(Phosphotransferase) domain 1 409 571 - -
Sto9g3232 612 MobiDBLite consensus disorder prediction 59 78 - -
Sto9g3232 612 Coils Coil 231 251 - -
Sto9g3232 612 SUPERFAMILY Protein kinase-like (PK-like) 345 555 IPR011009 -
Sto9g3232 612 Coils Coil 269 327 - -
Sto9g3232 612 PANTHER OS02G0152300 PROTEIN 410 594 - -
Sto9g3232 612 PANTHER OS02G0152300 PROTEIN 14 100 - -
Sto9g3232 612 PANTHER OS02G0152300 PROTEIN 104 159 - -
Sto9g3232 612 PANTHER OS02G0152300 PROTEIN 189 408 - -
Sto9g3232 612 MobiDBLite consensus disorder prediction 60 74 - -
Sto9g3232 612 SMART serkin_6 365 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3232 612 Pfam Protein kinase domain 414 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3232 612 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 14 100 - -
Sto9g3232 612 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 189 408 - -
Sto9g3232 612 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 410 594 - -
Sto9g3232 612 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 104 159 - -
Sto9g3232 612 ProSiteProfiles Protein kinase domain profile. 280 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3232 Sto-Chr9 32583967 32587818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3232 404 569 Receptor kinase-like Gene Family AT5G35380 75.301 1.44e-78 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Sto9g3232 Pkinase 8.4e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3232 - - pmum:103320118 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3232 9 32583967 32587818 Sto9g3232 9 32583967 32587818 ECH