Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3230 ATGGCTTATCAAACAGCATACTATTGTCTTCTCCCATTAGTAGTAATCATCATCACGCTGGCCATTTGTTCTGTGCCATCATTGGGTGAGATAGACCCTCAACTTTTGGTGAAGTTCAAGAGCTTCTTGTTCAATGCTAATGCTTTAAACAACTGGGGGAACGAGTCTATCAGTTTGTGCAACTGGACTGGTTTATTATGCACCAACCACACATTTCACGGCTTGAGATTAGAGAACATGGGACTAAGTGGTATGATTGATGTAGACACCCTCTTGAAACTCTCTAATTTGACAAGTTTTAGTATCATTAACAACAGCTTTGAAGGTCCAATGCCTGAATTCAGAAAGCTTGAGAGGTTAAAGGGTTTGTTTTTGTCTAATAATAAGTTCACTGGTGAAATTCCGGATGATGCTTTTGAGGGCATGAAATACTTGAAGAAGATATTCTTGGCTGAAAATGGGTTTACAGGTCACATTCCTTCATCCCTTGCTGAATCTCCTAGACTCTTGGATTTGGACTTACATGGAAACATCTTTCAAGGCAACATACCAAAATTCAGACAAAACCATTTCAGAGTGTTTAATTTGTCCCACAACCAATTGGAGGGTCCAATACCAGAAAGCTTAAGCAATTATGACCCTAGTTCATATTATGGCAACAAAGGAGTTTGTGGAAAACCATTATATGCTTGCAGCAGTTTGACCTCATATAACAACCACAGTACCATTTCACatcaagaaaaaggaaagaagcaCCCTGTAGTTATTGCTGCTATAGTAGTGGTGGCTGTGCTTGCCTTGGCTTCAATAGTGGCACTTATTTTCATTATCCACCGCCGTCGCCGCCAATGGAAAATTTCACAGAACAATGAAGGCTTAAGGGAGAGTAGTACTACTCATTCCATTGATGTGACAGATGATGGGTTCAAGAAGGGTGAGAATGGAGAGTTGAGTTTTGTTAAGGAAGAGTACAGAGAGGAATTTGATTTGTACGACCTACTTAGGGCTTCAGCTGAGGTTCTGGGAAGTGGTAGATTCGGATCCACCTATAAGGCTAATGTTTCAAACGGGTCATCTGTGGTGGTGAAAAGATTTAAGCACATGAACAGGGTTGGGAAGGAAGAGTTCTCAGAGCACATTACAAAGCTTGGAAGGTTGACACATCCTAACCTACTCCCACTTGTTGCATTCTGCTATAGAGAAGAAGAGAAACTACTGGTTTACAACTTCGTTGAAAATGGAAGCTTGGCTAGTCATCTCCATGGTAGGGTTAGGGTTAACTCTGGTTTGGACTGGCCAACTAGATTGAACATCATAAAAGGAGTAGCAAGGGGATTAGCATACCTGTACAAAGAATTTCCAGGGCAAAAACTTCCTCATGGGCATCTGAAATCCTCGAATGTTCTGCTAAACCAATCAATGGAGCCCCATTTGACAGAGTATGGTCTTATCCCAGTGATGAACAAAAACCACGCTAAAGAGTTCATGGCAGCCTACAAGGCCCCAGAATCATATGGACCCAACAAGAAGACAGACGTGTGGTGCTTGGGGATACTGATTCTTGAAGTGCTGACAGGAAAACTCCCAGAAAATTatatgagaaaaggaaaggagGGTGATGAAGATTTGGGAAGATGGGTGAGAAGAATGGTGAGGGAGGAATGGACAGGGGAGGTGTTGGATAAGGAGATAATGGGAGTGAGAAATGGGGAGGGTGAGATACTGAAGTTGTTAGAGATTGGGATGTGTTGCTGCGAATGGGATGTGGAGAATAGGTGGGATTGGAGAGAGGCAGTGGCTAAGATTGAAGAGTTGAAGGAAAGAgatagggaagaagaagaagaagaagatgatgatgaatggtCTTCCAATGCTAGTGAGGATGAGACGGAGTTATCTCCCTCTCATAATCTTAATCACTAA 1923 0.4061 MAYQTAYYCLLPLVVIIITLAICSVPSLGEIDPQLLVKFKSFLFNANALNNWGNESISLCNWTGLLCTNHTFHGLRLENMGLSGMIDVDTLLKLSNLTSFSIINNSFEGPMPEFRKLERLKGLFLSNNKFTGEIPDDAFEGMKYLKKIFLAENGFTGHIPSSLAESPRLLDLDLHGNIFQGNIPKFRQNHFRVFNLSHNQLEGPIPESLSNYDPSSYYGNKGVCGKPLYACSSLTSYNNHSTISHQEKGKKHPVVIAAIVVVAVLALASIVALIFIIHRRRRQWKISQNNEGLRESSTTHSIDVTDDGFKKGENGELSFVKEEYREEFDLYDLLRASAEVLGSGRFGSTYKANVSNGSSVVVKRFKHMNRVGKEEFSEHITKLGRLTHPNLLPLVAFCYREEEKLLVYNFVENGSLASHLHGRVRVNSGLDWPTRLNIIKGVARGLAYLYKEFPGQKLPHGHLKSSNVLLNQSMEPHLTEYGLIPVMNKNHAKEFMAAYKAPESYGPNKKTDVWCLGILILEVLTGKLPENYMRKGKEGDEDLGRWVRRMVREEWTGEVLDKEIMGVRNGEGEILKLLEIGMCCCEWDVENRWDWREAVAKIEELKERDREEEEEEDDDEWSSNASEDETELSPSHNLNH 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3230 640 Pfam Leucine rich repeat N-terminal domain 32 67 IPR013210 -
Sto9g3230 640 SUPERFAMILY Protein kinase-like (PK-like) 338 605 IPR011009 -
Sto9g3230 640 SUPERFAMILY L domain-like 40 212 - -
Sto9g3230 640 Pfam Protein kinase domain 338 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3230 640 Gene3D Transferase(Phosphotransferase) domain 1 411 631 - -
Sto9g3230 640 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 616 - -
Sto9g3230 640 ProSitePatterns Protein kinases ATP-binding region signature. 341 373 IPR017441 GO:0005524
Sto9g3230 640 ProSiteProfiles Protein kinase domain profile. 335 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3230 640 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 13 616 - -
Sto9g3230 640 Gene3D Phosphorylase Kinase; domain 1 308 410 - -
Sto9g3230 640 Gene3D Ribonuclease Inhibitor 191 232 IPR032675 -
Sto9g3230 640 MobiDBLite consensus disorder prediction 609 626 - -
Sto9g3230 640 MobiDBLite consensus disorder prediction 604 640 - -
Sto9g3230 640 Gene3D Ribonuclease Inhibitor 30 189 IPR032675 -
Sto9g3230 640 Coils Coil 595 615 - -
Sto9g3230 640 Pfam Leucine rich repeat 119 177 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3230 Sto-Chr9 32575565 32578069 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3230 5 629 Receptor kinase-like Gene Family AT5G35390 46.870 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto9g3230 Pkinase 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3230 - - gmx:100781593 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3230 9 32575565 32578069 Sto9g3230 9 32575565 32578069 ECH