Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3219 ATGGAGACCAAACCTGCCGGCGTCTTGCCTGCGTGCTCCGCGACTCAATCGGTGAACACGTCGTCGATTTTCTCCGGCGGCGACGATTTTAAACGATCGCCGTCGGAGTTGGACCTGGAAGAGTTTCTGCAGAAGGCAGTGGGATCGGCGAAGGAGGAGGACGTGAAACTGAAACCTAGCGAGTTCTGGTGTCATAGAGACAAAAGCTACGCCGATACGGATGTTTTCGGCGGCGTTTGCTCCGATGATCTCGACGCCGCTTTCCGAAATCCGGATGAAGTGTGTGGGTTTTCAACTTGTGGGGGACTAAGAGTAACAGATACTCTTCTCTGGTCCCAAAACGCCACTCCCAAGCACTCAACCATCTCTGCTACCATTGAATCTCAGTCATCCATTTGTGGTACTGTTTGTAGCCCAGTGTCAGCTAATCAACCAAGCGGCAGAGATAATAATCAAGCAAAAGGAACTACTAGTGGTTCCTCACGTGAGCAATCTGATGAAGATGATGTAGCAGGCCCTTGTGAACAGAGTACCAACCCTATTGATATGAAGCGCCTTAGAAGGAAGGTCTCTAATCGGGAATCTGCCAGAAGATCGAGAAGAAGAAAACAAGCTCATTTGGCTGACCTTGAGTTGCAGGTTGAACAACTAAGATTGGAAAATGCTGCCTTATACAAGCAGCTTACAGATGCTAGTCAGCAATTTCGCGAGGCTGATACAAATAACCGAGTGCTGAAATCAGATGTCGAAGCTTTGAGAGCTAAGGTGAAGTTAGCTGAAGATATGGTAACTAGGGGCTCCTTCACCACCTTGAACAACCAGCTGCTTCAGAATCAGAATCAGCTAAACACAGCACCACAACTTAATGCAACTAATGTTCGTCGCATGGCAAATGTCTCCCCTACCATCACTGTCCATGGAAATGAAGCTTCATTTGCTGGTATTGCAATTGATGGTCACAATTCATCTCTTGGACTTGAAAACTTAGGTATCAGCAATACCAATTTCAACACTGGTGTTATAAGTGATGCTATGAGCTGTGTTACTGAAATATTTCAGTGA 1062 0.4661 METKPAGVLPACSATQSVNTSSIFSGGDDFKRSPSELDLEEFLQKAVGSAKEEDVKLKPSEFWCHRDKSYADTDVFGGVCSDDLDAAFRNPDEVCGFSTCGGLRVTDTLLWSQNATPKHSTISATIESQSSICGTVCSPVSANQPSGRDNNQAKGTTSGSSREQSDEDDVAGPCEQSTNPIDMKRLRRKVSNRESARRSRRRKQAHLADLELQVEQLRLENAALYKQLTDASQQFREADTNNRVLKSDVEALRAKVKLAEDMVTRGSFTTLNNQLLQNQNQLNTAPQLNATNVRRMANVSPTITVHGNEASFAGIAIDGHNSSLGLENLGISNTNFNTGVISDAMSCVTEIFQ 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3219 353 Coils Coil 242 262 - -
Sto9g3219 353 MobiDBLite consensus disorder prediction 141 160 - -
Sto9g3219 353 CDD bZIP_plant_GBF1 185 236 IPR045314 GO:0003700|GO:0006355
Sto9g3219 353 Coils Coil 193 234 - -
Sto9g3219 353 PANTHER BASIC LEUCINE ZIPPER 63 30 352 - -
Sto9g3219 353 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 182 245 IPR004827 GO:0003700|GO:0006355
Sto9g3219 353 Gene3D - 183 240 - -
Sto9g3219 353 SUPERFAMILY Leucine zipper domain 184 234 IPR046347 GO:0003700|GO:0006355
Sto9g3219 353 PANTHER BASIC LEUCINE ZIPPER 9 30 352 - -
Sto9g3219 353 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 187 202 IPR004827 GO:0003700|GO:0006355
Sto9g3219 353 Pfam bZIP transcription factor 183 230 IPR004827 GO:0003700|GO:0006355
Sto9g3219 353 SMART brlzneu 180 244 IPR004827 GO:0003700|GO:0006355
Sto9g3219 353 MobiDBLite consensus disorder prediction 141 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3219 Sto-Chr9 32509821 32513129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3219 107 352 bZIP Transcription Factor Family AT5G24800 49.402 2.87e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto9g3219 bZIP_1 8e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3219 K25784 - gmx:778193 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3219 9 32509821 32513129 Sto9g3219 9 32509821 32513129 ECH