Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3208 ATGGCAAGGGAACGAACCCGGAAACGGCCTCGTCTCACCTGGGACGAAGCCCCAACGTCTGAGCCAGAGGTTGCTGCTTGCGCGCAAAGGGCTCTTGTGGTGGGTGATGAAGGATTCCAAAATAGGCATGCATCGCCTCCAAGAAGAGACGACGATCGTGAAGGGCATTACGTATTTAATCTTGGCGAAAATCTCACTTCTAGATATAAAATCCTCAGCAAGATGGGTGAAGGCACATTTGGTCGAGTTTTGGAATGTTGGGATCGCCAAACACGAGAATATGTGGCCATCAAGGTAGTTAGAAGCATACCAAAATACCGTGATGCAGCAATGATTGAGGTTGATGTGCTTCAACGTCTAGTTAAAAATGAGACAAGCACCTCACGCTGTGTGCATATCCAGAACTGGTTTGATTACCGGAATCACATATGTATTGTATTTGAGAAGCTTGGACCAAGCTTATTTGATTTtctaaagagaaataaatactgCCCATTCCCTGTGGATCTTGTTCGGGAATTTGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGACCTACGCCTAATCCACACTGACCTGAAGCCAGAAAATATACTTCTGGTTTCTCCTGAATATGTAAAGCTCCCCAGCTGTAAGAGGATTTCCTCAGACGAAGTGCAATCCAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGTAGTACTGCATTTGATAATCAGAATCACAGCTCCATTGTTTCTACAAGGCATTACCGAGCCCCTGAGATAATTCTAGGTCTAGGGTGGTCATACCCATGTGATTTGTGGAGTGTTGGATGTATTCTCATTGAACTTATTTCGGGCAAAGCATTGTTTCAGACTCATGAAAACTTGGAGCACTTGGCAATGATGGAGAGAGTTTTGGGACCTCTACCAGAGCACATGGCTCGAAGGGCTAAAGGTGCTGAAAAGTACTTCAGGCATGGATCTCGTCTAAATTGGCCTGAAGGAGCTGTTTCAAGGGAGAGTATTCGAGCAGTAAAGAAGCTTGATCATCTGAAGGATCTTGTATCGAGACAAGTAGAGTCCTCGAGAGCTTCTTTAATCCACTTGTTACATGGCTTATTGACGTATGATCCGTCTGAACGCCTAACAGCTAGCCAAGCCCTTGATCATCCGTTCTTTAGGAATCCAACTTAA 1194 0.4422 MARERTRKRPRLTWDEAPTSEPEVAACAQRALVVGDEGFQNRHASPPRRDDDREGHYVFNLGENLTSRYKILSKMGEGTFGRVLECWDRQTREYVAIKVVRSIPKYRDAAMIEVDVLQRLVKNETSTSRCVHIQNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSPEYVKLPSCKRISSDEVQSRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEIILGLGWSYPCDLWSVGCILIELISGKALFQTHENLEHLAMMERVLGPLPEHMARRAKGAEKYFRHGSRLNWPEGAVSRESIRAVKKLDHLKDLVSRQVESSRASLIHLLHGLLTYDPSERLTASQALDHPFFRNPT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3208 397 Gene3D Transferase(Phosphotransferase) domain 1 123 393 - -
Sto9g3208 397 CDD PKc_CLK 56 393 - -
Sto9g3208 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Sto9g3208 397 SMART serkin_6 69 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3208 397 MobiDBLite consensus disorder prediction 1 22 - -
Sto9g3208 397 ProSiteProfiles Protein kinase domain profile. 69 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3208 397 PANTHER BNAA07G37640D PROTEIN 5 394 - -
Sto9g3208 397 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 5 394 - -
Sto9g3208 397 Pfam Protein kinase domain 69 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3208 397 Gene3D Phosphorylase Kinase; domain 1 56 149 - -
Sto9g3208 397 MobiDBLite consensus disorder prediction 1 16 - -
Sto9g3208 397 SUPERFAMILY Protein kinase-like (PK-like) 56 395 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3208 Sto-Chr9 32463807 32467666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3208 68 395 Core Cell Cycle Gene Families AT3G48750 27.463 4.77e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Sto9g3208 Pkinase 7.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3208 K08287 - gmx:100782453 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3208 9 32463807 32467666 Sto9g3208 9 32463807 32467666 ECH