Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3201 ATGGGTAAGGCCGGTAAGGGAACAGGTAGCTTTGGGAAAAGGAGGAACAAGACGCATACACTCTGTGTGAGATGCGGACGCAGGAGCTTCCACCTCCAGAAGAGTCGCTGCGCTGCTTGTGCTTATCCAGCGAGCCGCGTCAGAAAATATAATTGGAGTGCTAAGGCTATCCGAAGAAAGACCACTGGAACTGGCCGTATGAGGTACCTCCGTCATGTTCCCCGCAGGTTTAAGACCAACTTTAGAGAAGgTACTCAAGCAACCCCCAGGAACAAAGCAGTGGCTGCAGCCTCCTAA 297 0.5219 MGKAGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAYPASRVRKYNWSAKAIRRKTTGTGRMRYLRHVPRRFKTNFREGTQATPRNKAVAAAS 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3201 98 Hamap 50S ribosomal protein L37e [rpl37e]. 5 56 IPR001569 GO:0003735|GO:0005840|GO:0006412
Sto9g3201 98 PANTHER 60S RIBOSOMAL PROTEIN L37 5 95 - -
Sto9g3201 98 Gene3D - 4 90 IPR011331 GO:0003735|GO:0005840|GO:0006412
Sto9g3201 98 PANTHER RIBOSOMAL PROTEIN L37 5 95 - -
Sto9g3201 98 SUPERFAMILY Zn-binding ribosomal proteins 5 58 IPR011332 GO:0006412
Sto9g3201 98 ProSitePatterns Ribosomal protein L37e signature. 7 26 IPR018267 GO:0003735|GO:0005840|GO:0006412
Sto9g3201 98 Pfam Ribosomal protein L37e 6 56 IPR001569 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3201 Sto-Chr9 32401350 32402927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3201 5 98 Cytoplasmic Ribosomal Protein Gene Family AT1G15250 87.234 6.91e-57 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3201 K02922 - dcr:108216561 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3201 9 32401350 32402927 Sto9g3201 9 32401350 32402927 ECH