Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3199 ATGCCACCGTTGGAAACTAATCCTACGCCATCACCATTGTCTGCACCATCTCCACTAATTAACTCACCATCGTCTTCAGTTCTACCGGTGGTGTTTCCAATGGCGCCACTTCCTTCGACTTCAGCATCTCCGGTTAACTCACCTGCCACTTTAGTTTCGCCGGTGTCATCCCCTCCGTCTCCTCACATTTTACTCCTTCCAGCTTCTTCGCCTCCCATTATGTCTCAACATGACACTACACATCCGCCACTTCACTCCCCTCCAACTTCACTCCTCCCGCCGCGGCCTTCGCCGTCTCCGGTGGTGTCCTCAGCATCCCAGCCACcgccatttccatttccatttacCTCAGCACCTGAAACGAGATTTTTCCCTCCAACAGTCACTTCTCGACCACCTTCAACACCCGCATTACCAAAGCCGATGTCTCCGGTACCGCAAATAACTTCTTCGCCGCCTCCAGTGATTCCATTTGTAACTCCCTTTGTTTCTCCACCGCCTTCCCCTCTGCCTATTATTCCATTTACCAAACCCCTTCCTCTTTCATCTTCCGCAACACCATCAAATCCCTCTCTGCCAGCATCAGCATCGGCACCGGAAACTCAGATGCCTTCATCCGAAAATTCTAGCGTGACTCCGTGGGGGCATCTTCCGCCGGCGCCATCGGCCGGTGTTTTGCCGTTGGCGGTGGAAGTTGAAAAGCCTCCGGCGTTTAATATGTCAACTGGGCTCGGAATTGGGCTCGTTATTGGTGGAGCTATACTTTTTGCGTTTGTTCTTGCCATTGTTTCATTTCTCTGTGTCCGTCGTAGGCATAGAAGGAAAAAGAATCTTGATCTTCTTCAACCATCACACAGTGTAGGATCAAAAGAGTCTCATATTATTGGAGTGGAAGCAAATCCAATGGTGACACCATATCTCCGGGAGGGAGGTGTGGGTTCTTGCTCTGTTAAATCAGAGCATGAGAATCCAATTCCAAACCATGCTCCTCCGAGCATTGGCTTCGGTTCTGTGAATGGTGTTTTCGCATATGAGGAGCTAGTAGTAGCCACTAGTGGTTTCTCAGAAGCCAAGCTTCTTGGACAaggtggttttgggtttgtgtaCAAGGGAGTTCTTCCGAGTGGGAAGGAAATTGCAGTTAAGAAGTTAAAATCAGGAAGCGAGCAAGGAGATAGAGAATTTCAAGCAGAAGTTGAGACAATTAGTCGGGTGCATCATAAACATCTCGTTGAATTGGTTGGCTACTGCGTTACCACAGCAGAGAGATTGCTCGTTTATGAATTCGTTCCAAATGACACATTGGAATCTCACTTACATGGTGAAGGGAAGCCTATCATAGAGTGGGCAACCAGAATTAAGATTGCTCTTGGCTCTGCAAGAGGGCTTGCTTATCTGCACGAAGATTTCAAAATACTGTACTTGTGTGCACAAGTTGTGACAATTGATTCTTTTAACAAGACCACGATACTTGCAGGTAATCCAGCAATCATTCACCGTGATATTAAAGCATCTAATATTCTTCTTGATTTTAAGTTTGATGCGAAGGTTTCTGACTTTGGTCTGGCTAAAATCTTTCCTAACACCGATAGTTGCGTAACTCACCTCACCACCAGAGTCGAAACAGCTTTAGCCAAAACTGCAGAGCATTTCATTCCAACAAGATCGATCTTCTTTAATCGTCGCAGGTATCTGGCTCCAGAGTATGCATCAAGTGGTAAATTAACAGATAAATCAGATGTATATTCTTTTGGAGTCATGCTTCTAGAACTAATAACGGGACGTCCACCTATCACTGCAACAGAATCCTCAAGAAATCAGAGCCTCGTTGATTGGGCTAGGCCTTTGCTCGCCCAAGCCCTACAAGATGGCGTGTTCAGCGACCTTGTTGATCCACGGTTGCAGAAAAATTATAGAGAAGATGAGATGGCTAGAATGATTACCTGTGCAGCTGCTTGTGTTCACCATTCAGCCAGGCTTCGACCTCGAATGAGCCAAATAGTAGGTGCCTTAGAAGGAGTGGTCTCTCTGGCCGATTTTGTTGAAGACATTAGAACTGAATATACTAAAGTATACAGTTGGTCAGGAAGTTCAAATTATGATGCCAACAAATACCAGGAGGACATAAGAAATTTCAATATGGCATTATCAAGTCAAAAGTACAGCTTTAGTGCGTGTAGTGAAAGCACTAGTGCTTATGGTCTTCATCCATCAGATTCAAGTAGCGAGGATAGCAACCAAATCAAGAGATAG 2253 0.4505 MPPLETNPTPSPLSAPSPLINSPSSSVLPVVFPMAPLPSTSASPVNSPATLVSPVSSPPSPHILLLPASSPPIMSQHDTTHPPLHSPPTSLLPPRPSPSPVVSSASQPPPFPFPFTSAPETRFFPPTVTSRPPSTPALPKPMSPVPQITSSPPPVIPFVTPFVSPPPSPLPIIPFTKPLPLSSSATPSNPSLPASASAPETQMPSSENSSVTPWGHLPPAPSAGVLPLAVEVEKPPAFNMSTGLGIGLVIGGAILFAFVLAIVSFLCVRRRHRRKKNLDLLQPSHSVGSKESHIIGVEANPMVTPYLREGGVGSCSVKSEHENPIPNHAPPSIGFGSVNGVFAYEELVVATSGFSEAKLLGQGGFGFVYKGVLPSGKEIAVKKLKSGSEQGDREFQAEVETISRVHHKHLVELVGYCVTTAERLLVYEFVPNDTLESHLHGEGKPIIEWATRIKIALGSARGLAYLHEDFKILYLCAQVVTIDSFNKTTILAGNPAIIHRDIKASNILLDFKFDAKVSDFGLAKIFPNTDSCVTHLTTRVETALAKTAEHFIPTRSIFFNRRRYLAPEYASSGKLTDKSDVYSFGVMLLELITGRPPITATESSRNQSLVDWARPLLAQALQDGVFSDLVDPRLQKNYREDEMARMITCAAACVHHSARLRPRMSQIVGALEGVVSLADFVEDIRTEYTKVYSWSGSSNYDANKYQEDIRNFNMALSSQKYSFSACSESTSAYGLHPSDSSSEDSNQIKR 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3199 750 ProSiteProfiles Protein kinase domain profile. 354 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3199 750 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK14 494 540 - -
Sto9g3199 750 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK14 564 718 - -
Sto9g3199 750 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK14 128 469 - -
Sto9g3199 750 MobiDBLite consensus disorder prediction 1 17 - -
Sto9g3199 750 MobiDBLite consensus disorder prediction 731 750 - -
Sto9g3199 750 SUPERFAMILY Protein kinase-like (PK-like) 336 671 IPR011009 -
Sto9g3199 750 MobiDBLite consensus disorder prediction 31 149 - -
Sto9g3199 750 Gene3D Transferase(Phosphotransferase) domain 1 430 690 - -
Sto9g3199 750 MobiDBLite consensus disorder prediction 183 215 - -
Sto9g3199 750 MobiDBLite consensus disorder prediction 1 20 - -
Sto9g3199 750 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 494 540 - -
Sto9g3199 750 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 564 718 - -
Sto9g3199 750 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 128 469 - -
Sto9g3199 750 MobiDBLite consensus disorder prediction 86 116 - -
Sto9g3199 750 SMART serkin_6 354 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3199 750 Pfam Protein tyrosine and serine/threonine kinase 357 469 IPR001245 GO:0004672|GO:0006468
Sto9g3199 750 CDD STKc_IRAK 360 673 - -
Sto9g3199 750 Gene3D Phosphorylase Kinase; domain 1 327 429 - -
Sto9g3199 750 MobiDBLite consensus disorder prediction 129 149 - -
Sto9g3199 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 497 509 IPR008271 GO:0004672|GO:0006468
Sto9g3199 750 Pfam Protein kinase domain 496 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3199 750 MobiDBLite consensus disorder prediction 39 57 - -
Sto9g3199 750 ProSitePatterns Protein kinases ATP-binding region signature. 360 383 IPR017441 GO:0005524
Sto9g3199 750 PRINTS Proline rich extensin signature 6 18 - -
Sto9g3199 750 PRINTS Proline rich extensin signature 22 38 - -
Sto9g3199 750 PRINTS Proline rich extensin signature 67 88 - -
Sto9g3199 750 PRINTS Proline rich extensin signature 92 108 - -
Sto9g3199 750 PRINTS Proline rich extensin signature 109 126 - -
Sto9g3199 750 PRINTS Proline rich extensin signature 132 157 - -
Sto9g3199 750 MobiDBLite consensus disorder prediction 183 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3199 Sto-Chr9 32395386 32398853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3199 286 743 Trihelix Transcription Factor Family AT4G32710 52.402 3.78e-132 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Sto9g3199 Pkinase 2.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3199 - - gmx:100810262 621.698