Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3181 ATGGCTACAGATACCAAAAGCACTTCGGTGAGGGTAAAGTCAAGTGGCCAAGATGGTTCTTCAGCTATCAAGAAGAAGATTGACAGCTCAACCAAGCAGCCGCTTGATTCAAAGATGAAATCCGTCACTGTCACGAAATCTGAGGTTAAATCGAAACCCATATCATCATCGTCTTCAAAAAAAGTGACGAAAACGGCTACAACAACCAAAGTGCGAGAGAAGAAAGTGTACAGTTTGGCTGGCCAGAAACATGATCCTCCCGAAGAGAAAGAACCTCTGAGGATATTCTACGAGTCATTGTCAAAACAGATACCATCTAGTGAAATGGCGGAATTTTGGTTAATGGAACATGGATTGCTATCTCCTGAAAGAGCTAAGAGAGCATTTGAGAAGAAGCAGAGGAAACAAAAGGAGATTCGAACAGGAACTCCTGTTAAGCCATCAAATTCAAAGCCACCGAGTAAGCCTGAGAGTTCACAGAAGCAGCAACGGCCATCAAAGAATGGTGATGTAAAAGCCAAGAAAAGAATTGTCAATGAAAGTGATGACGACGACGATTTCATTTTAAGTCCCAAAAGAAGAAAAGGCCAAACTAGGCATCAAACAATTGGTAAGGGCTTTGTTATTGTTACTGTGCTTAAAAGTCAAAAGCccagaaaagaaaaacagacaaaaaagaaaatgagagagTGGTTACCATTACTAGAAACCCAGAATTCCCAAAACGCAGAACCCAGGAGGGCAAAACGACATCGAGACTCCAACAAGCACCCAGAGTATCGCGGGGTTCGCATGCGAAATTGGGGGAAATGGGTATCGGAAATTCGCGAGCCACGGAAGAAATCGCGAATCTGGCTGGGTACATTCCCCACTCCAGAAATGGCAGCAAGAGCACACGACGTGGCAGCACTGAGCATCAAGGGCAATTCCGCCATTCTGAATTTCCCCCACCTCGCCCATCTCCTCCCTCgtcctctctccctctctcctcGCGATGTTCAGGCCGCTGCTTCCAAGGCTGCTCACATGGAGAACTTGGTCTTGGACTCTCCCCCAACATCCGACACACTCATGTCCTCCTTCGTGTCTGCCATGGCCGATGATTCTTCCGATGAATTGAGTCAGATCATAGAGCTTCCCAGGTTGGAAACAAGCTATGACGACACACACACTACTCTGGAATTGGTGAAGGAGTTTGTGTTTATGGACTGGCAAGAGGGGTGGATGTATGAGCACCCACCATGGTTGCACAGTATGGATGATTGTGATGATGCCTATGTGGCTGATCAGCTCTGGAATTACTAG 1305 0.4437 MATDTKSTSVRVKSSGQDGSSAIKKKIDSSTKQPLDSKMKSVTVTKSEVKSKPISSSSSKKVTKTATTTKVREKKVYSLAGQKHDPPEEKEPLRIFYESLSKQIPSSEMAEFWLMEHGLLSPERAKRAFEKKQRKQKEIRTGTPVKPSNSKPPSKPESSQKQQRPSKNGDVKAKKRIVNESDDDDDFILSPKRRKGQTRHQTIGKGFVIVTVLKSQKPRKEKQTKKKMREWLPLLETQNSQNAEPRRAKRHRDSNKHPEYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPHLAHLLPRPLSLSPRDVQAAASKAAHMENLVLDSPPTSDTLMSSFVSAMADDSSDELSQIIELPRLETSYDDTHTTLELVKEFVFMDWQEGWMYEHPPWLHSMDDCDDAYVADQLWNY 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3181 434 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 234 428 - -
Sto9g3181 434 Pfam AP2 domain 258 308 IPR001471 GO:0003700|GO:0006355
Sto9g3181 434 PRINTS Ethylene responsive element binding protein signature 260 271 IPR001471 GO:0003700|GO:0006355
Sto9g3181 434 PRINTS Ethylene responsive element binding protein signature 282 298 IPR001471 GO:0003700|GO:0006355
Sto9g3181 434 MobiDBLite consensus disorder prediction 1 65 - -
Sto9g3181 434 MobiDBLite consensus disorder prediction 66 91 - -
Sto9g3181 434 MobiDBLite consensus disorder prediction 167 193 - -
Sto9g3181 434 CDD AP2 260 318 IPR001471 GO:0003700|GO:0006355
Sto9g3181 434 MobiDBLite consensus disorder prediction 124 141 - -
Sto9g3181 434 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 234 428 - -
Sto9g3181 434 Gene3D AP2/ERF domain 259 317 IPR036955 GO:0003700|GO:0006355
Sto9g3181 434 ProSiteProfiles AP2/ERF domain profile. 259 316 IPR001471 GO:0003700|GO:0006355
Sto9g3181 434 SUPERFAMILY DNA-binding domain 259 317 IPR016177 GO:0003677
Sto9g3181 434 MobiDBLite consensus disorder prediction 1 91 - -
Sto9g3181 434 MobiDBLite consensus disorder prediction 142 166 - -
Sto9g3181 434 SMART rav1_2 259 322 IPR001471 GO:0003700|GO:0006355
Sto9g3181 434 MobiDBLite consensus disorder prediction 124 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3181 Sto-Chr9 32262325 32269134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3181 246 421 AP2-EREBP Transcription Factor Family AT5G11590 58.919 4.30e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto9g3181 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3181 K09286 - gmx:100786782 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3181 9 32262325 32269134 Sto9g3181 9 32262325 32269134 ECH