Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3165 ATGGAGAACGGAAAGTATGTACGGTACACGCCGGAGCAGGTGGATGCACTGGAGAGGCTTTACCATGAATGCCCGAAGCCTAGTTCCATGCGCCGCCAGCAGCTCATCAGAGAGTGTCCCATTCTCTCCAATATCGAGCCCAAGCAGATCAAGGTTTGGTTTCAGAATCGAAGATGTAGAGAGAAGCAGCGGAAAGAATCGTCACGGCTGCAAACTGTGAACAGGAAGCTGACGGCGATGAATAAACTACTGATGGAGGAAAATGAGAGGCTGCAGAAGCAAGTGTCACAGCTGGTTTACGAGAACAGCTTTTTCCGGCAACAGCAAACGCAGAATGCTACGGCTACCCTTGCTACGACGGACACAAGTTGTGAGTCGGTGGTAACCAGCGGTCAGCAGCACCATGTGACAGCACAGCATCCACCAAGGGATGCTAGCCCTGCTGGACTTTTGTCCATTGCAGAGGAGACTTTAGCAGAGTTTCTTTCAAAGGCCACTGGAACTGCTGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCATTGCTATTTCTCATGATTGCCATGGAGTGGCAGCACGAGCCTGCGGCCTTGTGGGTCTGGAGCCTACAAGGGTTGCTGAAATCCTCAAAGATAGGCCATCATGGTTTCGTGATTGCCGTGCTTTGGACATTCTGAATGTGATGTCCACTGGAAATGGGGGAACTATTGAACTGCTTTACATGCAGTTGTATGCACCAACAACATTGGCACCAGGTCGTGACTTCTGGTTGCTGCGCTACACATCGCTTTTGGAGGATGGAAGTCTAGTGGTCTGTGAAAGATCACTTAACAACACACAGAATGGACCTACAGTTCCCCCAGTGCAGCATTTTGTTAGAGCAGACATGCTGCCAAGTGGCTATCTGATTAGACCTTGTGAAGGAGGTGGATCCATTATTCATATTGTTGATCATATGGATTTAGAGcCTTGGAGTGTCCCTGAAGTGTTGCGCCCACTTTATGAGTCAACAACACTGCATGCTCAGAAGACAACCATGGCGGCTTTACGTCATCTGAGGCAAATTTCTCAAGAAGCGTCTCAGCCAAATGTCTCGGGATGGGGAAGAAGGCCTGCAGCTCTACGTGCACTCAGTCGGCGGTTGAGCAAaggATTCAATGAAGCTGTCAATGGGTTTGCAGATGATGGCTGGTCCATGTTAGAAAGTGATGGCATTGATGATGTCACCCTTCTTGTAAATTCATCTCCTAACAAGATGATGGGAGTAAATCTTGGACATAACATTGGATTTCCTTCTATGAGCAGTTCTGTGCTATGTGCCAAAGCATCAATGTTGCTTCAGAATGTCCCTCCAGCCATTCTTCTTAGATTCTTGCGGGAGCATAGATCAGAGTGGGCAGATAGCAGTATCGATGCTTACTCAGCTGCTGCCATTAAAGCTGGTCCCTGTAGCTTACCAGGTGCCCGGGTAGGAGGTTTTGGGGGTCAGTTCATGGAGGTCATTAAGCTTGAAAACATGGGTTACTATAGGGATGACATGACTATACCTGGGGATATTTTCCTCTTGCAACTTTGTAATGGAGCAGATGAACATGCAGTTGGCACCTCTGCAGAACTCATTTTTGCTCCGATTGATGCAACTTTCTCTGATGATGCGCCCATTTTACCTTCTGGTTTCCGCATCATACCCCTTGATTCTAACATGGATACTGTTGGTCCAAACCGTACACTTGATCTGGCTTCTGCTCTTGAAGTTAAAACCACTGGAAACAAAGCAGGCGGTGACAATTCTGGTAATTCAGGGAGCACAAAATCTGTGATGACAATAGCATTTCAGTTTGCATTTGAAGTCCACCTTCAGGACAATGTAGCCTCTATGGCTCGACAGTATGTCCGCAGTATCATTGCATCTGTTCAGAGGGTTGCTTTAGCGCTCTCCCCTTTGAATTTTGGTTCTCACAATGGTTTTCACACACCTCCTGGCACTCCTGAGGCACAAACACTTGCTCGCTGGATCTGTCAAAGCTACAGATGCTATCTAGGGGTAGAATTGCTAAAATGTGAAGGCAATGAACCCATTCTCAAATCCCTTTGGCACCACTCAGATGCGGTCCTGTGCTGCTCTTTGAagGCATTACCCGTTTTTACGTTTGCAAATCAAGCTGGACTTGACATGCTTGAGACAACCTTGGTTGCTCTTCAAGACATCACTCTGGAAAAAATCTTTGACGACAATGGGAAGAAAACCCTGTGCTCTGAATTCCCCCATATAATGCAGCAGGGTTTTATGTGCATGCAAGGTGGTATCTGTTTGTCGAGCATGGGGAGGCCAGTGTCGTATGAGAGAGCAGTGGCATGGAAAGTATTGAATGACGAAGAAACGGCCCATTGCATCTGTTTCATGTTCATCAACTGGTCTTTTGTCTGA 2448 0.4734 MENGKYVRYTPEQVDALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENERLQKQVSQLVYENSFFRQQQTQNATATLATTDTSCESVVTSGQQHHVTAQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHDCHGVAARACGLVGLEPTRVAEILKDRPSWFRDCRALDILNVMSTGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPTVPPVQHFVRADMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESTTLHAQKTTMAALRHLRQISQEASQPNVSGWGRRPAALRALSRRLSKGFNEAVNGFADDGWSMLESDGIDDVTLLVNSSPNKMMGVNLGHNIGFPSMSSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCSLPGARVGGFGGQFMEVIKLENMGYYRDDMTIPGDIFLLQLCNGADEHAVGTSAELIFAPIDATFSDDAPILPSGFRIIPLDSNMDTVGPNRTLDLASALEVKTTGNKAGGDNSGNSGSTKSVMTIAFQFAFEVHLQDNVASMARQYVRSIIASVQRVALALSPLNFGSHNGFHTPPGTPEAQTLARWICQSYRCYLGVELLKCEGNEPILKSLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTLCSEFPHIMQQGFMCMQGGICLSSMGRPVSYERAVAWKVLNDEETAHCICFMFINWSFV 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3165 815 SUPERFAMILY Bet v1-like 152 364 - -
Sto9g3165 815 Pfam Homeodomain 5 63 IPR001356 GO:0003677
Sto9g3165 815 Pfam START domain 153 361 IPR002913 GO:0008289
Sto9g3165 815 Gene3D - 1 71 - -
Sto9g3165 815 Coils Coil 70 101 - -
Sto9g3165 815 ProSiteProfiles START domain profile. 143 343 IPR002913 GO:0008289
Sto9g3165 815 SMART START_1 152 362 IPR002913 GO:0008289
Sto9g3165 815 SUPERFAMILY Homeodomain-like 5 66 IPR009057 -
Sto9g3165 815 SMART HOX_1 2 68 IPR001356 GO:0003677
Sto9g3165 815 ProSiteProfiles 'Homeobox' domain profile. 1 64 IPR001356 GO:0003677
Sto9g3165 815 CDD bZIP 57 96 - -
Sto9g3165 815 Pfam MEKHLA domain 674 814 IPR013978 -
Sto9g3165 815 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 815 IPR044830 GO:0003700
Sto9g3165 815 CDD START_ArGLABRA2_like 147 362 - -
Sto9g3165 815 CDD homeodomain 5 65 IPR001356 GO:0003677
Sto9g3165 815 Gene3D - 187 368 IPR023393 -
Sto9g3165 815 PANTHER CLASS III HD-ZIP PROTEIN CNA1 1 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3165 Sto-Chr9 32176634 32182320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3165 1 815 Homeobox Transcription Factor Family AT4G32880 78.752 0.0 1348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Sto9g3165 START 5.1e-53 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3165 K09338 - gmx:100815727 1461.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3165 9 32176634 32182320 Sto9g3165 9 32176634 32182320 ECH