Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3164 ATGGCTAAAGGATCCTCAGGAGCTCAAAGGTTCCCTAAGTCCCTTGCTTCGTTTATGTGCCTCGTCATGCTCCTGCTCAACCTAATTCACTCCTCACAGTCACAATCACGTGGCCATCCACAACAACTGGAAGAAGTAGAGCTCCACCTTCTCTTATCCTTCAAATCTTCCATTAACGATCCTCTTCACACTCTCTCCAACTGGATCAATTCTTCATCCTCTATTTGTGACTGTAACAACAATCTAACCGGCTCCTTGCCTGATTTCTTATTCTCCCACTCATTTTCCCACCTGGAAACCCTCGATCTCTCTAACAACATCTTTTCCGGCAAAATTCCTCCTCAGCTTGGCTTGCTTTCTAGCCTAATATATCTTGATGTTGGAGGGAACGTCCTGGAGGGAGAAATTCCAAGTTCCATCACCAACATCACCACTCTACAGTATTTGACATTGGCTTCCAACCAGTTGGTGGGTGAAATTCCCGGAGACATAGGTGTGCTCAACAACCTCAAGTGGATTTACTTGGGCTACAACAACCTCTCCGGCCAGATTCCAAAGAGTATAGGAGAATTAGTGTGGTTGAATCATCTTGATCTTGTGTACAACAATCTCTCGGGACAAATTCCGCAGTCTCTCGGAAACCTCAGTAACCTTGAGTTTCTCTTCCTCTACAAGAACAGCCTCACGGGTCCAATTCCGGCCTCCATTTTTGAGCTGAACAAGCTTGTTTCGCTTGATCTCAGTGATAATTCTCTTACGGGTGAGATCTCTGAGCTTGTGCTTAATCTGAAGAGACTAGAGGTTCTTCACCTTTTCTCAAACAATTTTACGGGGAAGATCCCACGCGCTTTAACCGCTTTGCCTCGGCTTCAAGTTCTCCAGCTGTGGTCCAACAGACTAACGGACCTTTCCACCAACAACCTTTCCGGGGAAATCCCACATGGTTTGTGTGACTCGCGCGTACTTTACAAACTCATCCTCTTCTCTAATTCTCTTCAAGGACAACTCCCACGCACCTTAACCACTTGCACAAGCCTACGGCGCGTGCGTCTCCAGAACAACAAGCTGTCTGGGGAGTTGCCTTCCCAATTTACCAAACTGCCCCTGATATACTTGTTGGACGTGTCCACCAATCAACTTTCTGGGAGAATCGATGACAGGATGTGGGACATGCCCGCGCTTCAAATGCTGAATTTGGGTAAAAACAACTTGTCCGGTGAGTTACCACACTCTTTTGGGAGTAACAAACTGGAGAGCTTGGACTTATCGGAGAATCGTTTTTCGGGTGAAATTCCGGCTTCTCTGGGAGGCTTATCAGAGCTCGTGCAATTGAAGTTAAGCAATAACAGATTGTCCGGGAATATACCAACTCAGATTTGTTCATGCAAGAAGCTCGTGGTATTAGACCTCAGTCACAACGAGCTTAATGGGCAAATACCGcgaagaagaagaaagaagttgGAGGCAATGAGAAGGGTGGAAACCCAAGATGGGACGTGGGAAATGCAGTTTTTTGACTCCAAGGCTTCCAAGGTGATCAATATGGAGGATGTTTTATGTTGGGCAAAAGAAGGGAACAATAAAATTGGAAGGAAAGGCAGACAGCAATTCCAAGTGGAAGAGATGAGTGAGCTAAATTCGTTGTGGGAAGACATGGTGGAGATTGGAAAGCTTGGGCATGCGAACATGGTGAAGGTGATGGGAATATGTAGGTCAGGTAAGGAAGGGTACTTGGTGTATGAGTACAGGGAAGGGAAATATTTAAGCGAGGTGGTAAGGAGTGTGAGGTGGGAAGGGCGAAGGAATATTGCAGTGGGAATAGCAAAAGCGTTAAAGTATTTGCATGCACATTGTTCAACTTCAACGCTTGTTTTGGTTGGTGAGGTGTCACCCCACAGAGTTGTGGTGGACGCAAAACACGTTGCTCGTCTCAAGTTGAGCTTCAGCCCTCCCCTCAAGGCCTCCATCTCCATTTCCTCACCTTACGTTGCTCCAgaAGCAAGAAACGGGAAGAAGGAGGTGACGGAGAAGAGTGGGATATACGGATTGGGGATGATTCTGATAGAATTGGTGACGGGAAGAAGTGCAGAAGTGGGGATGGAGAGCATGGTGGAGTGGGCCCGGTACTGCTATTCGGACTGTCATGTGGATATGTGGGTGGACCCGATGATGAAGGGCCCTCACAACGACGTCGTTGACGTCATGAACTTGGCTCTCCACTGCACTGCCACGGATCCCAGCGCTAGGCCATGCGCTACTCAAGTCTTGAAAACTCTAAACGCTCTTGCTGCCAACCCTACTCTTTATTCCTGCGTTTCCTCCTCACCCTCTCCCTGA 2337 0.4715 MAKGSSGAQRFPKSLASFMCLVMLLLNLIHSSQSQSRGHPQQLEEVELHLLLSFKSSINDPLHTLSNWINSSSSICDCNNNLTGSLPDFLFSHSFSHLETLDLSNNIFSGKIPPQLGLLSSLIYLDVGGNVLEGEIPSSITNITTLQYLTLASNQLVGEIPGDIGVLNNLKWIYLGYNNLSGQIPKSIGELVWLNHLDLVYNNLSGQIPQSLGNLSNLEFLFLYKNSLTGPIPASIFELNKLVSLDLSDNSLTGEISELVLNLKRLEVLHLFSNNFTGKIPRALTALPRLQVLQLWSNRLTDLSTNNLSGEIPHGLCDSRVLYKLILFSNSLQGQLPRTLTTCTSLRRVRLQNNKLSGELPSQFTKLPLIYLLDVSTNQLSGRIDDRMWDMPALQMLNLGKNNLSGELPHSFGSNKLESLDLSENRFSGEIPASLGGLSELVQLKLSNNRLSGNIPTQICSCKKLVVLDLSHNELNGQIPRRRRKKLEAMRRVETQDGTWEMQFFDSKASKVINMEDVLCWAKEGNNKIGRKGRQQFQVEEMSELNSLWEDMVEIGKLGHANMVKVMGICRSGKEGYLVYEYREGKYLSEVVRSVRWEGRRNIAVGIAKALKYLHAHCSTSTLVLVGEVSPHRVVVDAKHVARLKLSFSPPLKASISISSPYVAPEARNGKKEVTEKSGIYGLGMILIELVTGRSAEVGMESMVEWARYCYSDCHVDMWVDPMMKGPHNDVVDVMNLALHCTATDPSARPCATQVLKTLNALAANPTLYSCVSSSPSP 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3164 778 PANTHER UNNAMED PRODUCT 496 762 - -
Sto9g3164 778 PANTHER UNNAMED PRODUCT 17 77 - -
Sto9g3164 778 PANTHER UNNAMED PRODUCT 79 481 - -
Sto9g3164 778 SUPERFAMILY L domain-like 47 303 - -
Sto9g3164 778 Gene3D Ribonuclease Inhibitor 240 303 IPR032675 -
Sto9g3164 778 Pfam Protein kinase domain 536 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3164 778 SUPERFAMILY Protein kinase-like (PK-like) 546 759 IPR011009 -
Sto9g3164 778 Gene3D Transferase(Phosphotransferase) domain 1 585 770 - -
Sto9g3164 778 PANTHER LEUCINE-RICH REPEAT PROTEIN, PLANT-TYPE-RELATED 17 77 - -
Sto9g3164 778 PANTHER LEUCINE-RICH REPEAT PROTEIN, PLANT-TYPE-RELATED 496 762 - -
Sto9g3164 778 PANTHER LEUCINE-RICH REPEAT PROTEIN, PLANT-TYPE-RELATED 79 481 - -
Sto9g3164 778 SUPERFAMILY L domain-like 302 481 - -
Sto9g3164 778 Gene3D Ribonuclease Inhibitor 187 239 IPR032675 -
Sto9g3164 778 Gene3D Phosphorylase Kinase; domain 1 527 582 - -
Sto9g3164 778 Gene3D Ribonuclease Inhibitor 304 386 IPR032675 -
Sto9g3164 778 Pfam Leucine rich repeat N-terminal domain 47 78 IPR013210 -
Sto9g3164 778 Pfam Leucine rich repeat 145 204 IPR001611 GO:0005515
Sto9g3164 778 Pfam Leucine rich repeat 345 404 IPR001611 GO:0005515
Sto9g3164 778 Pfam Leucine rich repeat 416 475 IPR001611 GO:0005515
Sto9g3164 778 Pfam Leucine Rich Repeat 97 115 IPR001611 GO:0005515
Sto9g3164 778 SMART serkin_6 473 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3164 778 ProSiteProfiles Protein kinase domain profile. 465 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3164 778 Gene3D Ribonuclease Inhibitor 387 499 IPR032675 -
Sto9g3164 778 Gene3D Ribonuclease Inhibitor 44 186 IPR032675 -
Sto9g3164 778 SMART LRR_typ_2 95 119 IPR003591 -
Sto9g3164 778 SMART LRR_typ_2 287 310 IPR003591 -
Sto9g3164 778 SMART LRR_typ_2 167 191 IPR003591 -
Sto9g3164 778 SMART LRR_typ_2 215 239 IPR003591 -
Sto9g3164 778 SMART LRR_typ_2 391 415 IPR003591 -
Sto9g3164 778 SMART LRR_typ_2 438 462 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3164 Sto-Chr9 32168555 32171599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3164 47 480 Receptor kinase-like Gene Family AT2G25790 50.097 8.35e-146 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Sto9g3164 Pkinase 4.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3164 - - adu:107470770 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3164 9 32168555 32171599 Sto9g3164 9 32168555 32171599 ECH