Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3160 ATGCCTGAACTGCGTAGCAGAGCACGCAGAAACCGGGCCATAGATACCTCAAACCCGACTCCGATTACGCAACCCGATAAGCCGACGGCGAGAACTCGCCAGAGGAGAAATACAGCGCCTAATACGAGAAATCGGAAGCAGAAGAACGCGATCGCAGCTGATGAAACAAATAATATTGTAGATAAAGACATCGAAGAAGGACAAGTGCCAGACGCACCGGTTAGGGTCTTCGGAAAGGAAGTTGGCAAAAAAGCCATGGATGAATATGACAGCGGTGGCCGGAGCCCCGATAAGGCTCCGGTGGCCGAAGATGAGGGCAGCACAGCTCCCCTTCCTGAGAAGGTCCAAGTTGGTGGTTCCCCGCTATACAGAGTCGATAGAAAATTAGGGAAAGGAGGATTTGGTCAAGTGTATGTAGGTAGGCGTGCAGGAGCTGCCAATTGTAATGTGGCCTTAAAGTTCGAGCATAGAAGCAGCAAAGGGTGTAATTATGGTCCGCCATATGAATGGCAGGTTTACAATGCACTAGGTGGTAGTCATGGTGTTCCACAAGTTCATTACAAGGGGCGGCAAGGTGACTACTATGTCATGGTCATGGATATGCTTGGCCCCAGTCTATGGGATGTGTGGAATAACAACTCACACACGATGTCTACAGAAATGGTGGCATGTATTGCAATTGAGGCTATCTCCATATTGGAAAAGATGCATTCTAGAGGATATGTGCATGGTGATGTAAAACCTGAGAACTTTTTGCTTGGGACCCCTGGTACTCCTGATGAGAAAAAGTTATTTCTGGTTGACCTAGGATTAGCAACACGGTGGCGTGATAGTTCAACTGGCCTTCATGTTGAGTATGATCAACGCCCAGATGTATTCAGAGGAACAGTAAGATATGCTAGTGTGCATGCTCATCTTGGTAGAACAGGTAGTAGGAGAGATGACTTGGAATCACTTGCTTACACTCTTATCTTCCTTCTTCGTGGTCGATTGCCTTGGCAAGGATACCAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAGAAGATGGCCACTTCCCCTGAAACTTTGTGTTGCTTTTGTCCTCAACCTTTCCGGCAGTTCGTTGAGTATGTTGTCAATTTGAAGTTTGATGAGGAACCTAATTATGCGAAGTATATTTCTCTCTTTGATGGTATTGTTGGTCCAAATCCAGACATCAGGCCAATAAATACTGATGGTGCTCAGAAGCTTATATGTCAGGTTGGGCATAAGAGAGGGCGATTGACCATGGAAGAGGATGATGATGAACAGCCAAAGAAGAAGGTCAGAATGGGAATGCCTGCAACCCAATGGATTAGTGTTTATAATGCTCGCCGACCAATGAAGCAAAGGTATCATTACAATGTTGCTGATGTGCGGCTGTCTCAACACATAGAGAAAGGAAATGAAGATGGGTTGTTTATCAGCAGTGTGGCTTCTTGTTCTAACCTTTGGGCACTTATTATGGATGCTGGCACTGGTTTCACTGCACAAGTTTATGAACTCTCACCTCACTTTCTTCACAAGgaATGGATTATGGAACAGTGGGAGAAGAATTACTACATTAGTGCCATAGCTGGAGCTAATAATGGTAGCTCCTTGGTTGTAATGTCCAAAGGAACCCAGTACTTACAGCAGTCATATAAAGTCAGTGATTCATTTCCATTCAAGTGGATCAATAAAAAATGGAGAGAAGGGTTTTATGTAACTGCCATGGCCACTGCTGGAAGTAGATGGGCAATTGTCATGTCTCGTGGTGCAGGATTTTCAGATCAGGTTGtggaacttgattttctatatCCCAGTGAAGGGATTCATCGTAGGTGGGATAATGGGTACCGCATCACATCAACTGCTGCAACTTGGGACCAAGCTGCTTTTGTTCTCAGTGTACCAAGAAGGAAACCGGCAGATGAGACTCAAGAGACACTCCGCACATCTGCTTTCCCTAGTACTCATGTTAAGGAAAAATGGGCCAAGAACCTATATATTGCGTCTATTTGTTATGGGAGAACAGTTTCATGA 2046 0.4477 MPELRSRARRNRAIDTSNPTPITQPDKPTARTRQRRNTAPNTRNRKQKNAIAADETNNIVDKDIEEGQVPDAPVRVFGKEVGKKAMDEYDSGGRSPDKAPVAEDEGSTAPLPEKVQVGGSPLYRVDRKLGKGGFGQVYVGRRAGAANCNVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPQVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGTPGTPDEKKLFLVDLGLATRWRDSSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTDGAQKLICQVGHKRGRLTMEEDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADVRLSQHIEKGNEDGLFISSVASCSNLWALIMDAGTGFTAQVYELSPHFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQAAFVLSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3160 681 MobiDBLite consensus disorder prediction 1 67 - -
Sto9g3160 681 ProSitePatterns Protein kinases ATP-binding region signature. 129 153 IPR017441 GO:0005524
Sto9g3160 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Sto9g3160 681 PANTHER - 85 655 - -
Sto9g3160 681 MobiDBLite consensus disorder prediction 13 28 - -
Sto9g3160 681 PANTHER CASEIN KINASE-RELATED 85 655 - -
Sto9g3160 681 Gene3D Transferase(Phosphotransferase) domain 1 97 437 - -
Sto9g3160 681 CDD STKc_CK1 123 390 - -
Sto9g3160 681 SUPERFAMILY Protein kinase-like (PK-like) 123 396 IPR011009 -
Sto9g3160 681 Pfam Protein kinase domain 123 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3160 681 SMART serkin_6 123 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3160 681 ProSiteProfiles Protein kinase domain profile. 123 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3160 681 MobiDBLite consensus disorder prediction 85 101 - -
Sto9g3160 681 MobiDBLite consensus disorder prediction 85 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3160 Sto-Chr9 32139691 32144446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3160 32 333 EF-hand Containing Proteins AT4G21940 23.418 1.79e-10 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Sto9g3160 Pkinase 2.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3160 - - zju:107420390 1235.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3160 9 32139691 32144446 Sto5g0665 5 4486284 4492833 CCT
Sto9g3160 9 32139691 32144446 Sto9g3160 9 32139691 32144446 ECH
Sto5g0665 5 4486284 4492833 Sto9g3160 9 32139691 32144446 ECH