Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto9g3139 ATGGATCGTCAGCACATGATTTCCTTTCTCATTCTTATGATCTCCATCTCCTCTACTATCCCACAAGTACTCCCACTCACAACCACCAACCAAACCCAATTTTTCGCTCTCCTCAAGCACTCCCTCTCCGGTAACTTCCCCTCCACTTGGGATGATCTCACCGGAGACAAGCCTGTTTGCAACTTCCACGGAGTTACCTGTAACAACCAAGGACACGTCATCCATCTTGACGTCTCACGTTGGTCTCTCTCTGGAAACTTCCCTTCCCATATATGCTCTTACTTCCCTCTCTTGCGTATTCTCAACATCAGCCATAATCCTATCACTGGACATTTTCCTCAATCCATACTCAATTGTTCCCACTTGGAAGAGCTTTATATGAGTTATACATCTCTTGTCGGGACACTTCCTGATTTCTCACCCTTGTCCATGTCTCTCACTACTCTTGATTTATCCTACAACCTCTTCACTGGTCACTTCCCCATGTCTGTCTTCAATCTCACAACTCTCCAAGTTCTTAACTTTAATGAGAATTCTGGTTTTGACTTATGGCACCTTCCACAGGATGTTCACAAACTCATGAATTTGAACACTATGGTGTTGACCACGTGCATGCTCCAAGGCCAAATCCCACCTTCCATAGGGAACCTCACGTCTCTTGTTGATCTTGAATTGAGTGGGAATTTCCTCACTGGTCATATTCCTCCAGAGATTGGATTGCTGAGAAATTTGCAGCAGCTTGAGCTTTATTATAATGAACTTGCTGGGGTTATACCTGAGGAGTTAGGGAATCTGAAGGAGCTAACGGACTTGGATATGTCAGTCAACAAGTTGACTGGGAATATTCCAGAATCTTTATGTCGTCTTCCAAAGCTTCAAGTCATGCAGATTTATAACAACAGCCTTACCGGGGAAATCCCAGCTGTGATAGAAAACTCAACTTCTTTGACAATCTTATCCCTGTATGACAATTTTTTGAGTGGAAATGTCCCTAGAAATTTGGGTCGCTTCTCTGGGTTGGTGGCTCTAGATTTGTCAGAAAACAAGCTTTCTGGTCCTCTTCCAATGGAGATTTGCAAGGGAGGTAAGCTGCTTTACTTTCTTGTTCTTGATAATGAGTTCTCTGGAGAGATTCCTCACAGTTATGGAGATTGCTTGACGCTTTTGAGGTTTCGTGTGAGTAGTAACCACTTGGAAGGCTCAATTCCCAAGGGTGTCTTTGGCTTGCTTCATGTTTCCATAATTGATTTGGCTTATAACAATTTTTCTGGTCCAATATCCGACACCATAGGGAGTTCCACTAATATGTCAGAGCTTTTCATACAGAAGAACATGTTTTCAGGGTCCATACCTTCCACAATCTCTAGTGCTACCAATCTAGTGAAGATTGATTTCAGTAACAACCTTCTCTCTGGTCCAATACCTTCTGAAATTGGCAATCTCAAGAAGCTTAATTTGCTTATGTTGCAAGGGAACAAGCTGGATTCTTCTATCCCAAGTTCACTTTCCTTATTGAAATCTCTCAATGTTCTTGATCTCTCCAACAACCTCTTGTCTGGGAGTATCCCTGAGAGTCTCTCTGCATTGCTACCTAACTCCATCAATTTTTCAAACAATCTGCTTTCTGGTCCAATTCCTTTCTCACTGGTAAAAGGAGGGCTAGTAGAAAGCTTTTCAGGGAATCCTGGTCTGTGTGTGTTATCTGTGTATGCAAACTCATCAGATTCAGATCATAAGAATTTCCCTGTGTGCTCACATATGCACAACAGAAAGAGGCTGAATACCATCTGGGTAGGTGGGGTTTTCCTAGCTATGTTCATCATTGGATTTGGAGTTATGTTGCTTCTAAAACGCAGGCTTAGCAAACACAAGTCTGATTTGGAACAAGATCATGATGACACACTATTGTCTTCCTCATTTTTCTCTTATGACTTGAAGAGCTTCCACAAATTAGGCTATGACCAACAGGAGATCATTGAGGGCATGGTGGATAAGAATATAGTGGGGTATGGAGGGTCTGGGACAGTGTACAAGATTGAACTTAAAAGTGGCGAGCTTGTTGCAGTGAAGAGGCTTTGGAGTCGATCATCAAAGGATTCAGATGAAGAGGACCGAATGGTTTTGGACAAGGAGTTGAAAACTGAGGTTGGGACATTGGGaagtataagacacaagaacaTAGTGAAGCTATACAGCTACTTCTCTAGCCTTGATTGTAGCTTGTTGGTGTATGAATACATGCCAAATGGTAATCTTTGGGATGCACTTCACAAAGGTTGGATCCATTTGGATTGGCCCACTCGCCATCAAATTGCACTGGGAATTGCACAGGGTTTGGCTTATCTCCATCATGATCTTCTTCCTCCTATCATTCACAGAGACATCAAATCAACCAACATCCTCTTGGACATTAATTACCAACCCAAAGTTGCAGATTTTGGGATTGCCAAGGTGTTACAAGCCAGAGGAGGGAAAGACTCCACCACAACTGTCATTGCAGGAACCTATGGTTACTTAGCCCCagAATATGCATATTCATGTAGAGCAACAAGCAAGTGTGATGTGTACAGTTTTGGGGTGATTCTGATGGAACTGATAAGTGGGAAGAAGCCAGTGGAGGCAGAGTTTGGAGAGAACAGGAATATTGTGTATTGGGTTTCAAGCAAAGTGGAAAACAAAGAAGGGATTGATGAGATAATAGATAAGAAATTATCAGGGTTAAAAATAGaaggaatgaaaataaattttaTGTCTtacaaaagaaaaAGGAAAATAAGAGTGGCTAAAAGTAGGTCATTTAATTTTGAAGAGATTGTGGAATCCTGGAGTAAGGACCCCAAAAACacagaaaagaagagaaacagCACAAAGTCCAAGAATTGA 2883 0.4117 MDRQHMISFLILMISISSTIPQVLPLTTTNQTQFFALLKHSLSGNFPSTWDDLTGDKPVCNFHGVTCNNQGHVIHLDVSRWSLSGNFPSHICSYFPLLRILNISHNPITGHFPQSILNCSHLEELYMSYTSLVGTLPDFSPLSMSLTTLDLSYNLFTGHFPMSVFNLTTLQVLNFNENSGFDLWHLPQDVHKLMNLNTMVLTTCMLQGQIPPSIGNLTSLVDLELSGNFLTGHIPPEIGLLRNLQQLELYYNELAGVIPEELGNLKELTDLDMSVNKLTGNIPESLCRLPKLQVMQIYNNSLTGEIPAVIENSTSLTILSLYDNFLSGNVPRNLGRFSGLVALDLSENKLSGPLPMEICKGGKLLYFLVLDNEFSGEIPHSYGDCLTLLRFRVSSNHLEGSIPKGVFGLLHVSIIDLAYNNFSGPISDTIGSSTNMSELFIQKNMFSGSIPSTISSATNLVKIDFSNNLLSGPIPSEIGNLKKLNLLMLQGNKLDSSIPSSLSLLKSLNVLDLSNNLLSGSIPESLSALLPNSINFSNNLLSGPIPFSLVKGGLVESFSGNPGLCVLSVYANSSDSDHKNFPVCSHMHNRKRLNTIWVGGVFLAMFIIGFGVMLLLKRRLSKHKSDLEQDHDDTLLSSSFFSYDLKSFHKLGYDQQEIIEGMVDKNIVGYGGSGTVYKIELKSGELVAVKRLWSRSSKDSDEEDRMVLDKELKTEVGTLGSIRHKNIVKLYSYFSSLDCSLLVYEYMPNGNLWDALHKGWIHLDWPTRHQIALGIAQGLAYLHHDLLPPIIHRDIKSTNILLDINYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSCRATSKCDVYSFGVILMELISGKKPVEAEFGENRNIVYWVSSKVENKEGIDEIIDKKLSGLKIEGMKINFMSYKRKRKIRVAKSRSFNFEEIVESWSKDPKNTEKKRNSTKSKN 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto9g3139 960 SUPERFAMILY L domain-like 287 546 - -
Sto9g3139 960 ProSiteProfiles Protein kinase domain profile. 662 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3139 960 ProSiteProfiles Leucine-rich repeat profile. 507 530 IPR001611 GO:0005515
Sto9g3139 960 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 9 940 - -
Sto9g3139 960 Gene3D Ribonuclease Inhibitor 297 575 IPR032675 -
Sto9g3139 960 SMART LRR_typ_2 95 119 IPR003591 -
Sto9g3139 960 SMART LRR_typ_2 265 289 IPR003591 -
Sto9g3139 960 SMART LRR_typ_2 505 529 IPR003591 -
Sto9g3139 960 SMART LRR_typ_2 217 240 IPR003591 -
Sto9g3139 960 SMART LRR_typ_2 481 504 IPR003591 -
Sto9g3139 960 SMART LRR_typ_2 241 264 IPR003591 -
Sto9g3139 960 Pfam Protein kinase domain 664 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3139 960 SMART serkin_6 662 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto9g3139 960 Pfam Leucine Rich Repeat 98 119 IPR001611 GO:0005515
Sto9g3139 960 SUPERFAMILY Protein kinase-like (PK-like) 652 881 IPR011009 -
Sto9g3139 960 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Sto9g3139 960 Gene3D Ribonuclease Inhibitor 29 182 IPR032675 -
Sto9g3139 960 Gene3D Ribonuclease Inhibitor 183 287 IPR032675 -
Sto9g3139 960 PRINTS Leucine-rich repeat signature 340 353 - -
Sto9g3139 960 PRINTS Leucine-rich repeat signature 505 518 - -
Sto9g3139 960 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 940 - -
Sto9g3139 960 Gene3D Transferase(Phosphotransferase) domain 1 747 958 - -
Sto9g3139 960 Gene3D Phosphorylase Kinase; domain 1 646 746 - -
Sto9g3139 960 SUPERFAMILY L domain-like 60 368 - -
Sto9g3139 960 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Sto9g3139 960 ProSitePatterns Protein kinases ATP-binding region signature. 668 690 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto9g3139 Sto-Chr9 32010224 32016092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto9g3139 26 926 Receptor kinase-like Gene Family AT5G49660 65.017 0.0 1164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto9g3139 Pkinase 8.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto9g3139 - - pop:7488181 1232.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3139 9 32010224 32016092 Sto9g3139 9 32010224 32016092 ECH